RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CASKO14936 926 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 ANXA4P09525 319 aaPredicted RBP3.98□□□□□ -1.77
CLK1-209ENST00000472679 GAP43P17677 238 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 CDH5P33151 784 aaPredicted RBP3.98□□□□□ -1.77
CLK1-209ENST00000472679 SPP2Q13103 211 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 CEBPEQ15744 281 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 CDKN3Q16667 212 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 ZNF658Q5TYW1 1059 aaPredicted RBP3.98□□□□□ -1.77
CLK1-209ENST00000472679 ISLR2Q6UXK2 745 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 STAC2Q6ZMT1 411 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 LPCAT2Q7L5N7 544 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 VASH2Q86V25 355 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 KRTAP11-1Q8IUC1 163 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 ARNTL2Q8WYA1 636 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 SLC25A38Q96DW6 304 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 B3GALT6Q96L58 329 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 TBC1D10AQ9BXI6 508 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 RAB17Q9H0T7 212 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 HSD3B7Q9H2F3 369 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 PIN4Q9Y237 131 aaKnown RBP3.98□□□□□ -1.77
CLK1-209ENST00000472679 L3MBTL1Q9Y468 752 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 GPRASP1Q5JY77 1395 aa3.98□□□□□ -1.77
CLK1-209ENST00000472679 KRT87PA6NCN2 255 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 HDAC3O15379 428 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 CCDC166P0CW27 439 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 RPL4P36578 427 aaKnown RBP3.97□□□□□ -1.77
CLK1-209ENST00000472679 RGRP47804 291 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 EXOSC2Q13868 293 aaKnown RBP3.97□□□□□ -1.77
CLK1-209ENST00000472679 DPYSL3Q14195 570 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 SBK1Q52WX2 424 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 IRGCQ6NXR0 463 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 CYS1Q717R9 158 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 VPS36Q86VN1 386 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 BPIFB2Q8N4F0 458 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 HDDC3Q8N4P3 179 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 PHYHIPLQ96FC7 376 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 FAM111AQ96PZ2 611 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 C19orf24Q9BVV8 132 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 RPAP3Q9H6T3 665 aaPredicted RBP3.97□□□□□ -1.77
CLK1-209ENST00000472679 ZNF702PQ9H963 129 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 ACTR8Q9H981 624 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 C1orf123Q9NWV4 160 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 UTP6Q9NYH9 597 aaKnown RBP3.97□□□□□ -1.77
CLK1-209ENST00000472679 EHFQ9NZC4 300 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 TMEM9Q9P0T7 183 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 ABCG2Q9UNQ0 655 aa3.97□□□□□ -1.77
CLK1-209ENST00000472679 PRRC2AP48634 2157 aaKnown RBP3.96□□□□□ -1.78
CLK1-209ENST00000472679 LYPD3O95274 346 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 APBB3O95704 486 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 XRCC1P18887 633 aaPredicted RBP3.96□□□□□ -1.78
CLK1-209ENST00000472679 P2RY4P51582 365 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 LIM2P55344 173 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 KCNJ11Q14654 390 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 ADPRMQ3LIE5 342 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 PAGE2BQ5JRK9 111 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 FAM120AOSQ5T036 256 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 BCORP1Q8N888 145 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 C14orf79Q96F83 325 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 TMEM121Q9BTD3 319 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 PNO1Q9NRX1 252 aaKnown RBP3.96□□□□□ -1.78
CLK1-209ENST00000472679 FLVCR1Q9Y5Y0 555 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 PARD3Q8TEW0 1356 aa3.96□□□□□ -1.78
CLK1-209ENST00000472679 CUX2O14529 1486 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 SAGE2PA6NJ88 616 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 ZNF254O75437 659 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 PGK1P00558 417 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 CA3P07451 260 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 RRASP10301 218 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 CCNA2P20248 432 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 ZP3P21754 424 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 NF2P35240 595 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 EMDP50402 254 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 DPYSQ14117 519 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 RAET1GQ6H3X3 334 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 RBM43Q6ZSC3 357 aaKnown RBP3.95□□□□□ -1.78
CLK1-209ENST00000472679 PRR22Q8IZ63 422 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 CERS5Q8N5B7 392 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 FAM122AQ96E09 287 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 ELMO2Q96JJ3 720 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 COMMD4Q9H0A8 199 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 GLT8D2Q9H1C3 349 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 NGBQ9NPG2 151 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 FOXJ3Q9UPW0 622 aa3.95□□□□□ -1.78
CLK1-209ENST00000472679 LRRC30A6NM36 301 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 WASHC1A8K0Z3 465 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 WASH3PC4AMC7 463 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 E9PLD3 99 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 RASGRF2O14827 1237 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 SCRG1O75711 98 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 HSPB1P04792 205 aaKnown RBP3.94□□□□□ -1.78
CLK1-209ENST00000472679 CD1EP15812 388 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 OR3A4PP47883 348 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 CAMLGP49069 296 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 NOVA1P51513 510 aaKnown RBP3.94□□□□□ -1.78
CLK1-209ENST00000472679 STX17P56962 302 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 RPS8P62241 208 aaKnown RBP3.94□□□□□ -1.78
CLK1-209ENST00000472679 ZNF154Q13106 437 aa3.94□□□□□ -1.78
CLK1-209ENST00000472679 PRR4Q16378 134 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms