RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 STX18Q9P2W9 335 aaKnown RBP9.03□□□□□ -0.96
CCM2-204ENST00000470837 TEKT2Q9UIF3 430 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 SH3GLB1Q9Y371 365 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 CROCCQ5TZA2 2017 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 A0A1W2PQ72 361 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 PRAMEF27A3QJZ7 478 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 CDC14CA4D256 554 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 AGAP5A6NIR3 686 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 WWP2O00308 870 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 SYT5O00445 386 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 TO15178 435 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 KIAA0513O60268 411 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 FCMRO60667 390 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 DEAF1O75398 565 aaPredicted RBP9.02□□□□□ -0.97
CCM2-204ENST00000470837 TIPRLO75663 272 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 IL33O95760 270 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 CST1P01037 141 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 LDLRP01130 860 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 SERPINA7P05543 415 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 FESP07332 822 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 THBS1P07996 1170 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 PABPC4LP0CB38 370 aaKnown RBP9.02□□□□□ -0.97
CCM2-204ENST00000470837 ENDOUP21128 410 aaKnown RBP9.02□□□□□ -0.97
CCM2-204ENST00000470837 ABCD3P28288 659 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 DCTP40126 519 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ARHGDIAP52565 204 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ATP12AP54707 1039 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 RRADP55042 308 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 CAMK2BQ13554 666 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 VTCN1Q7Z7D3 282 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 PQLC1Q8N2U9 271 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 SLC15A4Q8N697 577 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ZSCAN1Q8NBB4 408 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 OR4N2Q8NGD1 307 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ELP5Q8TE02 316 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 THAP4Q8WY91 577 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 EFHD2Q96C19 240 aaPredicted RBP9.02□□□□□ -0.97
CCM2-204ENST00000470837 TMCO6Q96DC7 493 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 OMA1Q96E52 524 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 IMMP1LQ96LU5 166 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ZNF347Q96SE7 839 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ADOQ96SZ5 270 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 SCNM1Q9BWG6 230 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 SAP130Q9H0E3 1048 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 VCXQ9H320 206 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 EVA1AQ9H8M9 152 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 HHATLQ9HCP6 504 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 IL1RAPQ9NPH3 570 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 UBQLN4Q9NRR5 601 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ABI3Q9P2A4 366 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 MYOTQ9UBF9 498 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 IL17BQ9UHF5 180 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 KLK13Q9UKR3 277 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ZNF443Q9Y2A4 671 aaPredicted RBP9.02□□□□□ -0.97
CCM2-204ENST00000470837 PCDHGA10Q9Y5H3 936 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 NPFFR2Q9Y5X5 522 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 MRPS18BQ9Y676 258 aaKnown RBP9.02□□□□□ -0.97
CCM2-204ENST00000470837 DSPPQ9NZW4 1301 aa9.02□□□□□ -0.97
CCM2-204ENST00000470837 ZNF891A8MT65 544 aaPredicted RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 hCG_2039718K7EN88 272 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 GTPBP1O00178 669 aaKnown RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 AP3D1O14617 1153 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 TP53I11O14683 189 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 TERTO14746 1132 aaKnown RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 SEC16AO15027 2179 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 E2F6O75461 281 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 GCM2O75603 506 aaPredicted RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 UTS2O95399 124 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 NID1P14543 1247 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 UQCRBP14927 111 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 LIFP15018 202 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 NAGAP17050 411 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 F8A1P23610 371 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 KCNJ5P48544 419 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 SSR4P51571 173 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 PNLIPRP2P54317 469 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 SMIM11AP58511 58 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 AIMP2Q13155 320 aaKnown RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 IL10RAQ13651 578 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 ATP1A4Q13733 1029 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 TGIF1Q15583 401 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 MAPK11Q15759 364 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 DUSP7Q16829 419 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 TCTN3Q6NUS6 607 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 JMJD6Q6NYC1 403 aaPredicted RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 DHRS4L2Q6PKH6 230 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 OPN5Q6U736 354 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 OLIG3Q7RTU3 272 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 ERMP1Q7Z2K6 904 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 HMGN2P46Q86SG4 172 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 RANBP3LQ86VV4 465 aaPredicted RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 RPS19BP1Q86WX3 136 aaKnown RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 CARM1Q86X55 608 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 VRK2Q86Y07 508 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 CMIPQ8IY22 773 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 DND1Q8IYX4 353 aaKnown RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 PRR22Q8IZ63 422 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 COL27A1Q8IZC6 1860 aaPredicted RBP9.01□□□□□ -0.97
CCM2-204ENST00000470837 TMEM156Q8N614 296 aa9.01□□□□□ -0.97
CCM2-204ENST00000470837 PAPD5Q8NDF8 572 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms