RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 NEUROD4Q9HD90 331 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 MED11Q9P086 117 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 EIF3LQ9Y262 564 aaKnown RBP15.79■□□□□ 0.12
COL7A1-208ENST00000470076 TESMINQ9Y4I5 508 aa15.79■□□□□ 0.12
COL7A1-208ENST00000470076 A0A1W2PPM1 405 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 TNFRSF21O75509 655 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 SMNDC1O75940 238 aaKnown RBP eCLIP15.78■□□□□ 0.12
COL7A1-208ENST00000470076 PROCP04070 461 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 CCT5P48643 541 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 DNAJB13P59910 316 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 STX5Q13190 355 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 CCDC153Q494R4 210 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 GLYR1Q49A26 553 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-208ENST00000470076 CNEP1R1Q8N9A8 125 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 DUSP19Q8WTR2 217 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 PIGQQ9BRB3 760 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 BEX4Q9NWD9 120 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-208ENST00000470076 ZNF337Q9Y3M9 751 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 ZNF175Q9Y473 711 aa15.78■□□□□ 0.12
COL7A1-208ENST00000470076 A0A1W2PPR1 153 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 OR2M5A3KFT3 312 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 UROSP10746 265 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 CD53P19397 219 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 PRPH2P23942 346 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 HOXC12P31275 282 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 CD79BP40259 229 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 CLDN15P56746 228 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 OCRLQ01968 901 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 FAM27E3Q08E93 113 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 C17orf67Q0P5P2 114 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 FGFBP1Q14512 234 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 VWA1Q6PCB0 445 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 SH2D5Q6ZV89 423 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 FIG4Q92562 907 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 C1GALT1C1Q96EU7 318 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 PGM2Q96G03 612 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 PINK1Q9BXM7 581 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 TBL1XR1Q9BZK7 514 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 RTN4RQ9BZR6 473 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 FLRT3Q9NZU0 649 aa15.77■□□□□ 0.12
COL7A1-208ENST00000470076 NPIPB8E9PQR5 432 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 SEC14L5O43304 696 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 EMC8O43402 210 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 PLIN3O60664 434 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 SEC22BO75396 215 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 KCNH1O95259 989 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 KIR2DL2P43627 348 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-208ENST00000470076 RFX3P48380 749 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 SUCLG1P53597 346 aaKnown RBP15.76■□□□□ 0.11
COL7A1-208ENST00000470076 RPS3AP61247 264 aaKnown RBP15.76■□□□□ 0.11
COL7A1-208ENST00000470076 KIAA0040Q15053 153 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 BTLAQ7Z6A9 289 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 MARCH3Q86UD3 253 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 WFDC11Q8NEX6 87 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 ZNF764Q96H86 408 aaPredicted RBP15.76■□□□□ 0.11
COL7A1-208ENST00000470076 EGLN2Q96KS0 407 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 FAM111AQ96PZ2 611 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 RHOXF2Q9BQY4 288 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 SLC39A3Q9BRY0 314 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 IQCGQ9H095 443 aaKnown RBP15.76■□□□□ 0.11
COL7A1-208ENST00000470076 RNF122Q9H9V4 155 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 HHATLQ9HCP6 504 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 OXSMQ9NWU1 459 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 ELOVL5Q9NYP7 299 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 ZNF226Q9NYT6 803 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 CCL27Q9Y4X3 112 aa15.76■□□□□ 0.11
COL7A1-208ENST00000470076 ARID1AO14497 2285 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 IGLV3-32A0A0A0MS00 114 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 H0YC42 278 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 H3BML4 177 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 SLC28A1O00337 649 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 PDPK1O15530 556 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 CTIFO43310 598 aaKnown RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 UTS2O95399 124 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 ANGPTL1O95841 491 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 CD8BP10966 210 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 PRPS2P11908 318 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 CPA3P15088 417 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 HOXB4P17483 251 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 GABRA3P34903 492 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 CRHR1P34998 444 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 TPD52P55327 224 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 CLDN20P56880 219 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 SIRPAP78324 504 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 PRR5P85299 388 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 VPS26BQ4G0F5 336 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 ZNF474Q6S9Z5 364 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 ZNF551Q7Z340 670 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 CCDC63Q8NA47 563 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 OR5M1Q8NGP8 315 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 FNDC9Q8TBE3 224 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 GFM2Q969S9 779 aaKnown RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 ZNF845Q96IR2 970 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 WFIKKN1Q96NZ8 548 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 GSX1Q9H4S2 264 aaPredicted RBP15.75■□□□□ 0.11
COL7A1-208ENST00000470076 PPCSQ9HAB8 311 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 TNFRSF12AQ9NP84 129 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 C1orf109Q9NX04 203 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 STOML1Q9UBI4 398 aa15.75■□□□□ 0.11
COL7A1-208ENST00000470076 AP4B1Q9Y6B7 739 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms