RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 ADH6P28332 368 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 MLLT3P42568 568 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ACTA2P62736 377 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ACTG2P63267 376 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PRAMEF8Q5VWM4 474 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PRAMEF7Q5VXH5 474 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PIAS4Q8N2W9 510 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ZNF740Q8NDX6 193 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ASB13Q8WXK3 278 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 TOE1Q96GM8 510 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FBXL20Q96IG2 436 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PHB2Q99623 299 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ZNF436Q9C0F3 470 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ZNF106Q9H2Y7 1883 aaKnown RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 hCG_2039718K7EN88 272 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FLRT2O43155 660 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 EMC8O43402 210 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 EFNA1P20827 205 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 GADD45AP24522 165 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 FAM69AQ5T7M9 428 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ABHD17CQ6PCB6 329 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 SLC15A4Q8N697 577 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 OR6Q1Q8NGQ2 317 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 OR8K5Q8NH50 307 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PDXPQ96GD0 296 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ZFYVE21Q9BQ24 234 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 A4GALTQ9NPC4 353 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CHURC1-FNTBB4DL54 471 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 VILLO15195 856 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 GABRG2P18507 467 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 CLDN2P57739 230 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 TARDBPQ13148 414 aaKnown RBP eCLIP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 USF2Q15853 346 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 COMMD2Q86X83 199 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 NAGSQ8N159 534 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 TSACCQ96A04 125 aaPredicted RBP6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 DPYSL5Q9BPU6 564 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 THSD1Q9NS62 852 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 ZNF69Q9UC07 566 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 UGT2A1Q9Y4X1 527 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 PTPRSQ13332 1948 aa6.58□□□□□ -1.36
GAPVD1-215ENST00000470056 A0A0J9YY10 115 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 EIF2S3P41091 472 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 CDH11P55287 796 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 HMGN3Q15651 99 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 TSTQ16762 297 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 PAQR7Q86WK9 346 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 TSEN15Q8WW01 171 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 ZFP3Q96NJ6 502 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 GPR174Q9BXC1 333 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 ABCG4Q9H172 646 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 KCNN3Q9UGI6 736 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 NUBP2Q9Y5Y2 271 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 DENND4CQ5VZ89 1909 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 NUDT19A8MXV4 375 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 STK25O00506 426 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 KRT33AO76009 404 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 ZNF14P17017 642 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 AQP1P29972 269 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 NCS1P62166 190 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 DLX2Q07687 328 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SLAMF1Q13291 335 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 METTL11BQ5VVY1 283 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 C6orf120Q7Z4R8 191 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 ACOT4Q8N9L9 421 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 OR5AK3PQ8NH89 298 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 RSC1A1Q92681 617 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 PIP5K1AQ99755 562 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 NPLQ9BXD5 320 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SPNS1Q9H2V7 528 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 USP22Q9UPT9 525 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SH2B3Q9UQQ2 575 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SLC25A12O75746 678 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SPARCP09486 303 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 PRKACAP17612 351 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 BCL6P41182 706 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 GZMMP51124 257 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 BMXP51813 675 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 E2F1Q01094 437 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 NPRL3Q12980 569 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 UBXN2BQ14CS0 331 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SF3A2Q15428 464 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 ULK3Q6PHR2 472 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 CHRDL2Q6WN34 429 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SVBPQ8N300 66 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 NT5CQ8TCD5 201 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 NXPE2Q96DL1 559 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 MGLLQ99685 303 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 UQCC2Q9BRT2 126 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 ABCG5Q9H222 651 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 FAM118AQ9NWS6 357 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 ACTR10Q9NZ32 417 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 APOBEC3BQ9UH17 382 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 LRIT2A6NDA9 550 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 RTCAO00442 366 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 BCAS1O75363 584 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SNAPINO95295 136 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 SNAP29O95721 258 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 HLA-DQA2P01906 255 aa6.57□□□□□ -1.36
GAPVD1-215ENST00000470056 RHCEP18577 417 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms