RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 AP1ARQ63HQ0 302 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 RHBDD2Q6NTF9 364 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 PGBD2Q6P3X8 592 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 KLHL17Q6TDP4 642 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 RRM2BQ7LG56 351 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 OLIG3Q7RTU3 272 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 RBM45Q8IUH3 476 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 CMIPQ8IY22 773 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 SVOPQ8N4V2 548 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 EID2Q8N6I1 236 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 OR4K5Q8NGD3 323 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 OR14A16Q8NHC5 309 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 PIGXQ8TBF5 258 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 IFI44Q8TCB0 444 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 IPCEF1Q8WWN9 437 aaPredicted RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 PIK3R3Q92569 461 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 GTPBP3Q969Y2 492 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 LOXL4Q96JB6 756 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 VSTM2LQ96N03 204 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 PTCHD1Q96NR3 888 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 GFM1Q96RP9 751 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 MCHR1Q99705 422 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 NIPSNAP1Q9BPW8 284 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 TUBA1CQ9BQE3 449 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 FUZQ9BT04 418 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 PRRG3Q9BZD7 231 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 QRSL1Q9H0R6 528 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 OR10A5Q9H207 317 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 MRTO4Q9UKD2 239 aaKnown RBP8.68□□□□□ -1.02
SMC1A-205ENST00000469129 RARRES3Q9UL19 164 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 OR10H1Q9Y4A9 318 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 MAU2Q9Y6X3 613 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 U3KQA8 63 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 ASXL3Q9C0F0 2248 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 CABIN1Q9Y6J0 2220 aa8.68□□□□□ -1.02
SMC1A-205ENST00000469129 IGKV3D-11A0A0A0MRZ8 115 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 TCRBV16S1A1N1A0A5B0 115 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CCDC160A6NGH7 325 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CPSF4LA6NMK7 179 aaKnown RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 ZAR1LA6NP61 321 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 FCMRO60667 390 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 FAM20BO75063 409 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CYP7B1O75881 506 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 KCNK2O95069 426 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CYC1P08574 325 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 MYF5P13349 255 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 S1PR1P21453 382 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 LCN1P31025 176 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 SSTR4P31391 388 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 OR1D4P47884 311 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 PGDP52209 483 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CRISP1P54107 249 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CDH15P55291 814 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 DCAF7P61962 342 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CCL7P80098 99 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 PSG6Q00889 435 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 ALDH6A1Q02252 535 aaKnown RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 MVKQ03426 396 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 PIN1Q13526 163 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 DECR1Q16698 335 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 ENTPD8Q5MY95 495 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CCNJQ5T5M9 372 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 MRPL2Q5T653 305 aaKnown RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 FIGNL1Q6PIW4 674 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CD300LDQ6UXZ3 194 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 DGAT2L6Q6ZPD8 337 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 ARHGAP22Q7Z5H3 698 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 COMTD1Q86VU5 262 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 GRAMD2AQ8IUY3 354 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 SLITRK4Q8IW52 837 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 TMEM151BQ8IW70 566 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 COL27A1Q8IZC6 1860 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 ZBTB44Q8NCP5 570 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 SIMC1Q8NDZ2 872 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CNIH3Q8TBE1 160 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 SLC7A13Q8TCU3 470 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 GNPDA2Q8TDQ7 276 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 ACOT11Q8WXI4 607 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 DIO2Q92813 273 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 DAZLQ92904 295 aaKnown RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 DGCR14Q96DF8 476 aaKnown RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CCDC74BQ96LY2 380 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 SLC46A1Q96NT5 459 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 MYCBPQ99417 103 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 PHOX2BQ99453 314 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 ZNF559Q9BR84 538 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CXorf56Q9H5V9 222 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 NECTIN3Q9NQS3 549 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 MAN2C1Q9NTJ4 1040 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 RLIMQ9NVW2 624 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 DHCR7Q9UBM7 475 aaKnown RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 COPS7AQ9UBW8 275 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 FTSJ1Q9UET6 329 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 CBLCQ9ULV8 474 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 TMEM184BQ9Y519 407 aaPredicted RBP8.67□□□□□ -1.02
SMC1A-205ENST00000469129 PCDHGB2Q9Y5G2 931 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 PCDHGA6Q9Y5G7 932 aa8.67□□□□□ -1.02
SMC1A-205ENST00000469129 PCDHGA5Q9Y5G8 931 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms