RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 OR11H7Q8NGC8 314 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 OR11H4Q8NGC9 324 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 OR5M3Q8NGP4 307 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 OR10A6Q8NH74 314 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 OR14A16Q8NHC5 309 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 AKR7LQ8NHP1 331 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PPP1R35Q8TAP8 253 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 WDR20Q8TBZ3 569 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 XAGE5Q8WWM1 108 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ACOT11Q8WXI4 607 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 HIST1H2ACQ93077 130 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RGMAQ96B86 450 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 R3HDM4Q96D70 268 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RRNAD1Q96FB5 475 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF419Q96HQ0 510 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 NOL4LQ96MY1 436 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF382Q96SR6 550 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PCYT2Q99447 389 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 S100A13Q99584 98 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 OMDQ99983 421 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SYT17Q9BSW7 474 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MSTO1Q9BUK6 570 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 KATNB1Q9BVA0 655 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 TMED9Q9BVK6 235 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 POLR2J2Q9GZM3 115 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 IKZF4Q9H2S9 585 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MVB12BQ9H7P6 319 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 DBNDD1Q9H9R9 158 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CERS4Q9HA82 394 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 FBRSL1Q9HCM7 1045 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SARS2Q9NP81 518 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 KRCC1Q9NPI7 259 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SERHLQ9NQF3 203 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 DMRT3Q9NQL9 472 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CYSLTR2Q9NS75 346 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 PRMT7Q9NVM4 692 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MRPS18AQ9NVS2 196 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 MS4A12Q9NXJ0 267 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 VNN3Q9NY84 501 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SLCO1C1Q9NYB5 712 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RASL12Q9NYN1 266 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF629Q9UEG4 869 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 FBXL2Q9UKC9 423 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 FZD10Q9ULW2 581 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RUVBL1Q9Y265 456 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 RPH3AQ9Y2J0 694 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 LSM2Q9Y333 95 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 EXOSC1Q9Y3B2 195 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 FIS1Q9Y3D6 152 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 CHTOPQ9Y3Y2 248 aaKnown RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM184BQ9Y519 407 aaPredicted RBP4.57□□□□□ -1.68
SF3B1-207ENST00000468925 V9GYQ6 96 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 COL18A1P39060 1754 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 SHANK3Q9BYB0 1731 aa4.57□□□□□ -1.68
SF3B1-207ENST00000468925 TRBV5-3A0A0A0MS03 114 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 LOC102723532A0A0G2JNH3 316 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 C2orf92A0A1B0GVN3 265 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 LCHNA4D1U4 455 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 ANXA2P2A6NMY6 339 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 B4E171 279 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 J3KR12 359 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 AP4M1O00189 453 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NDUFS8O00217 210 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TNFRSF11BO00300 401 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CLDN4O14493 209 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 UBFD1O14562 309 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TCAPO15273 167 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 LRRTM2O43300 516 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF749O43361 778 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TGOLN2O43493 480 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 VEGFDO43915 354 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 GMFGO60234 142 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 KLK8O60259 260 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 FADS1O60427 444 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CREBL2O60519 120 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 UGDHO60701 494 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 GALR3O60755 368 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 GGCTO75223 188 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NDUFS6O75380 124 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 ATP6AP2O75787 350 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 POP7O75817 140 aaKnown RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 RECQL4O94761 1208 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 KDM4BO94953 1096 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 UBL3O95164 117 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 WISP3O95389 354 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NFATC1O95644 943 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 NTSR2O95665 410 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 RAB3DO95716 219 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 RAB36O95755 333 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 GLP2RO95838 553 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 TBX18O95935 607 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CFDP00746 253 aaPredicted RBP4.56□□□□□ -1.68
SF3B1-207ENST00000468925 MBP02144 154 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CRYBA1P05813 215 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 HEXBP07686 556 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 PFKMP08237 780 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 CLUP10909 449 aa4.56□□□□□ -1.68
SF3B1-207ENST00000468925 APEHP13798 732 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms