RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 PRPS1L1P21108 318 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 COL8A1P27658 744 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 PTPN6P29350 595 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 RPL3P39023 403 aaKnown RBP10.17□□□□□ -0.78
COL4A6-205ENST00000468338 MAN2A2P49641 1150 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 SMSP52788 366 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 GAS1P54826 345 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 MANFP55145 182 aaKnown RBP10.17□□□□□ -0.78
COL4A6-205ENST00000468338 MAGOHP61326 146 aaKnown RBP10.17□□□□□ -0.78
COL4A6-205ENST00000468338 GAB1Q13480 694 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 EFR3AQ14156 821 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 POU4F3Q15319 338 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 CDSNQ15517 529 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 NHSL2Q5HYW2 709 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 CAMKMTQ7Z624 323 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 SLC44A2Q8IWA5 706 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-205ENST00000468338 NATD1Q8N6N6 113 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 WDSUB1Q8N9V3 476 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 FNDC5Q8NAU1 212 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 ZFP28Q8NHY6 868 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 SARAFQ96BY9 339 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 TUBGCP3Q96CW5 907 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 TMCO6Q96DC7 493 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 ADOQ96SZ5 270 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 OSBPL11Q9BXB4 747 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 METTL7AQ9H8H3 244 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 AKTIPQ9H8T0 292 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 PNPLA3Q9NST1 481 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 SIRT3Q9NTG7 399 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-205ENST00000468338 SPRR3Q9UBC9 169 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 ARHGAP21Q5T5U3 1957 aa10.17□□□□□ -0.78
COL4A6-205ENST00000468338 PRAMEF25A6NGN4 478 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 B4DXG7 233 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 ANKRD28O15084 1053 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 NKX2-2O95096 273 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 IL33O95760 270 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 HOXD4P09016 255 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 G6PDP11413 515 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 GDF1P27539 372 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 HPCAL1P37235 193 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 DCTP40126 519 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 MASP1P48740 699 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 CLDN8P56748 225 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 CRYZQ08257 329 aaKnown RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 ZNF155Q12901 538 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 HSPB3Q12988 150 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 MAD2L1Q13257 205 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 ZNF630Q2M218 657 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 HHATQ5VTY9 493 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 RTL6Q6ICC9 239 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 TMEM211Q6ICI0 200 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 ZCCHC12Q6PEW1 402 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 C3P1Q6ZMU1 363 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 NCCRP1Q6ZVX7 275 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 LARP4Q71RC2 724 aaKnown RBP eCLIP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 HDXQ7Z353 690 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 RPRMLQ8N4K4 120 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 KRTCAP2Q8N6L1 136 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 ACBD4Q8NC06 268 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 OR7A2PQ8NGA2 310 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 OR1J4Q8NGS1 313 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 CEP70Q8NHQ1 597 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 JSRP1Q96MG2 331 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 MDFIQ99750 246 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 TM9SF2Q99805 663 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 C1orf50Q9BV19 199 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 SLC6A15Q9H2J7 730 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 MEAF6Q9HAF1 191 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 GALNT9Q9HCQ5 603 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 THAP1Q9NVV9 213 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 NOP53Q9NZM5 478 aaKnown RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 TNFRSF10DQ9UBN6 386 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 CBLCQ9ULV8 474 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 EIF3LQ9Y262 564 aaKnown RBP10.16□□□□□ -0.78
COL4A6-205ENST00000468338 FAM215AQ9Y5M1 114 aa10.16□□□□□ -0.78
COL4A6-205ENST00000468338 INTS1Q8N201 2190 aaKnown RBP10.15□□□□□ -0.78
COL4A6-205ENST00000468338 GNB5O14775 395 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 EMC8O43402 210 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 FADS1O60427 444 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 WDR1O75083 606 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 CBR3O75828 277 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 CYP4B1P13584 511 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 ACVR2AP27037 513 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 MRPS22P82650 360 aaKnown RBP10.15□□□□□ -0.78
COL4A6-205ENST00000468338 ZNHIT3Q15649 155 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-205ENST00000468338 PDCD2Q16342 344 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-205ENST00000468338 DECR1Q16698 335 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 WLSQ5T9L3 541 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 CPTPQ5TA50 214 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 AGBL2Q5U5Z8 902 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 VASNQ6EMK4 673 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 OGFOD2Q6N063 350 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 ANGPTL8Q6UXH0 198 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 WDR53Q7Z5U6 358 aaPredicted RBP10.15□□□□□ -0.78
COL4A6-205ENST00000468338 PLCZ1Q86YW0 608 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 GOLGA6L1Q8N7Z2 621 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 ANKRD42Q8N9B4 389 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 CDRT4Q8N9R6 151 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 NUP43Q8NFH3 380 aa10.15□□□□□ -0.78
COL4A6-205ENST00000468338 RAB3IL1Q8TBN0 382 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms