RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FAM120CQ9NX05 1096 aaKnown RBP22.09■■□□□ 1.13
PTCH1-210ENST00000468211 OR2M5A3KFT3 312 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 SLC22A20A6NK97 555 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 SMIM23A6NLE4 172 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 SEC22BO75396 215 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 UROSP10746 265 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 CPA3P15088 417 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 GABRA3P34903 492 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 CPOXP36551 454 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 CLDN20P56880 219 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 FAM27E3Q08E93 113 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 KEAP1Q14145 624 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 DEFB113Q30KQ7 82 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 ZNF385BQ569K4 471 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 IKBIPQ70UQ0 350 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 P4HA3Q7Z4N8 544 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 BTLAQ7Z6A9 289 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 PIK3R3Q92569 461 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 CIDECQ96AQ7 238 aaPredicted RBP22.08■■□□□ 1.13
PTCH1-210ENST00000468211 POM121Q96HA1 1249 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 GSX1Q9H4S2 264 aaPredicted RBP22.08■■□□□ 1.13
PTCH1-210ENST00000468211 EQTNQ9NQ60 294 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 SDHAF3Q9NRP4 125 aa22.08■■□□□ 1.13
PTCH1-210ENST00000468211 WBP11Q9Y2W2 641 aaKnown RBP22.08■■□□□ 1.13
PTCH1-210ENST00000468211 H3BQF6 201 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 MSTNO14793 375 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 SEC14L5O43304 696 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 SMNDC1O75940 238 aaKnown RBP eCLIP22.07■■□□□ 1.12
PTCH1-210ENST00000468211 UTS2O95399 124 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 PRPH2P23942 346 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 KIR2DL2P43627 348 aaPredicted RBP22.07■■□□□ 1.12
PTCH1-210ENST00000468211 DIO3P55073 304 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 NAA20P61599 178 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 HSPB3Q12988 150 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 ZNF474Q6S9Z5 364 aaPredicted RBP22.07■■□□□ 1.12
PTCH1-210ENST00000468211 Q6ZSR9 355 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 EXOC3L1Q86VI1 746 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 MEIOBQ8N635 442 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 CNEP1R1Q8N9A8 125 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 EPS8L3Q8TE67 593 aaKnown RBP22.07■■□□□ 1.12
PTCH1-210ENST00000468211 C1GALT1C1Q96EU7 318 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 ZNF845Q96IR2 970 aaPredicted RBP22.07■■□□□ 1.12
PTCH1-210ENST00000468211 OPN3Q9H1Y3 402 aaPredicted RBP22.07■■□□□ 1.12
PTCH1-210ENST00000468211 TUBB1Q9H4B7 451 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 TESMINQ9Y4I5 508 aa22.07■■□□□ 1.12
PTCH1-210ENST00000468211 SHISA8B8ZZ34 492 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 SIAH2O43255 324 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 GMFGO60234 142 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 MAP3K8P41279 467 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 CCT5P48643 541 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 SIRPAP78324 504 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 ZNHIT3Q15649 155 aaPredicted RBP22.06■■□□□ 1.12
PTCH1-210ENST00000468211 GRAMD1BQ3KR37 738 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 CHMP1BQ7LBR1 199 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 C4orf33Q8N1A6 199 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 CCDC63Q8NA47 563 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 WFDC11Q8NEX6 87 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 UBLCP1Q8WVY7 318 aaPredicted RBP22.06■■□□□ 1.12
PTCH1-210ENST00000468211 PINK1Q9BXM7 581 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 LRTM1Q9HBL6 345 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 HEATR5AQ86XA9 2040 aa22.06■■□□□ 1.12
PTCH1-210ENST00000468211 NAV3Q8IVL0 2385 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 NPIPB8E9PQR5 432 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 H3BML4 177 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 PDPK1O15530 556 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 AKAP10O43572 662 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 GOSR1O95249 250 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 CRHP06850 196 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 CD53P19397 219 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 EEF1A1P68104 462 aaKnown RBP22.05■■□□□ 1.12
PTCH1-210ENST00000468211 GANABQ14697 944 aaKnown RBP22.05■■□□□ 1.12
PTCH1-210ENST00000468211 EEF1A1P5Q5VTE0 462 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 LIPMQ5VYY2 423 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 OR2A2Q6IF42 318 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 GALNT10Q86SR1 603 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 TDRPQ86YL5 185 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 C10orf107Q8IVU9 208 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 FNDC9Q8TBE3 224 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 SMPDL3BQ92485 455 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 HOXB13Q92826 284 aaPredicted RBP22.05■■□□□ 1.12
PTCH1-210ENST00000468211 PGM2Q96G03 612 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 FCRL1Q96LA6 429 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 WFIKKN1Q96NZ8 548 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 GATA5Q9BWX5 397 aaPredicted RBP22.05■■□□□ 1.12
PTCH1-210ENST00000468211 C1orf109Q9NX04 203 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 FIS1Q9Y3D6 152 aa22.05■■□□□ 1.12
PTCH1-210ENST00000468211 COPEO14579 308 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 TNFRSF21O75509 655 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 ANGPTL1O95841 491 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 IFI6P09912 130 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 SDC1P18827 310 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 KRT4P19013 534 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 PCLAFQ15004 111 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 TMEM44Q2T9K0 475 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 KRTAP1-3Q8IUG1 177 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 CNPY4Q8N129 248 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 CLHC1Q8NHS4 586 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 METTL2AQ96IZ6 378 aaKnown RBP22.04■■□□□ 1.12
PTCH1-210ENST00000468211 TSSK3Q96PN8 268 aa22.04■■□□□ 1.12
PTCH1-210ENST00000468211 TBL1XR1Q9BZK7 514 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms