RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 IL20RBQ6UXL0 311 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 PTOV1Q86YD1 416 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 C11orf65Q8NCR3 313 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 OR10A6Q8NH74 314 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 FBXO27Q8NI29 283 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 SPPL2AQ8TCT8 520 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 EFHD2Q96C19 240 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-205ENST00000466897 NTNG2Q96CW9 530 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 SCMH1Q96GD3 660 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 ZNF583Q96ND8 569 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 ADOQ96SZ5 270 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 TRIM8Q9BZR9 551 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 HOXD1Q9GZZ0 328 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 CMTM6Q9NX76 183 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 TAS2R1Q9NYW7 299 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 TP53TG5Q9Y2B4 290 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 L3MBTL1Q9Y468 752 aa13.96□□□□□ -0.17
NPHP4-205ENST00000466897 CNTRLQ7Z7A1 2325 aa13.96□□□□□ -0.18
NPHP4-205ENST00000466897 TRAV17A0A0B4J275 112 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 NPIPB9F8W1W9 429 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 SLC25A12O75746 678 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 H6PDO95479 791 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 BCHEP06276 602 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 CHRM4P08173 479 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 NUDT7P0C024 238 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 NR2F1P10589 423 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 CYP4B1P13584 511 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 PCGF2P35227 344 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 RASSF2P50749 326 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 FBXW4P57775 412 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 SLC25A3Q00325 362 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 CDK6Q00534 326 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 VEZF1Q14119 521 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 SYPL1Q16563 259 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 DNAL1Q4LDG9 190 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 CCNJQ5T5M9 372 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 SLC22A10Q63ZE4 541 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 TYW3Q6IPR3 259 aaKnown RBP13.95□□□□□ -0.18
NPHP4-205ENST00000466897 FIGNL1Q6PIW4 674 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 FRRS1Q6ZNA5 592 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 Q6ZS92 163 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 FBXW8Q8N3Y1 598 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 ANKFN1Q8N957 763 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 PSD4Q8NDX1 1056 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 OR10G3Q8NGC4 313 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 TMEM19Q96HH6 336 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 SIGLEC12Q96PQ1 595 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 TREX2Q9BQ50 279 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-205ENST00000466897 SLC38A1Q9H2H9 487 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 ALG2Q9H553 416 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 HHATLQ9HCP6 504 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 TIMMDC1Q9NPL8 285 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 UBQLN4Q9NRR5 601 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 ANKRD10Q9NXR5 420 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 PLA2G3Q9NZ20 509 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 SUCOQ9UBS9 1254 aaKnown RBP13.95□□□□□ -0.18
NPHP4-205ENST00000466897 CNOT11Q9UKZ1 510 aaKnown RBP13.95□□□□□ -0.18
NPHP4-205ENST00000466897 PRPF19Q9UMS4 504 aaKnown RBP13.95□□□□□ -0.18
NPHP4-205ENST00000466897 WDR45Q9Y484 360 aa13.95□□□□□ -0.18
NPHP4-205ENST00000466897 A0A0G2JPF8 293 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 A0A1W2PQD3 144 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 HNRNPCL2B2RXH8 293 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 HNRNPCL3B7ZW38 293 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 SLC28A2O43868 658 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 UTS2O95399 124 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ZIC2O95409 532 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-205ENST00000466897 HNRNPCL4P0DMR1 293 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 CD46P15529 392 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 TBXA2RP21731 343 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 RPS4Y1P22090 263 aaKnown RBP13.94□□□□□ -0.18
NPHP4-205ENST00000466897 EVI2BP34910 448 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ATP12AP54707 1039 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ZNF141Q15928 474 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 VMACQ2NL98 169 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 FLYWCH1Q4VC44 716 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 GPAT3Q53EU6 434 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 SAMD4BQ5PRF9 694 aaKnown RBP13.94□□□□□ -0.18
NPHP4-205ENST00000466897 REEP3Q6NUK4 255 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 BNC2Q6ZN30 1099 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-205ENST00000466897 RINLQ6ZS11 566 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ASB18Q6ZVZ8 466 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ZAR1Q86SH2 424 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ZZZ3Q8IYH5 903 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 DEFB107AQ8IZN7 70 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ZNF619Q8N2I2 560 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 EXD3Q8N9H8 876 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ZNF527Q8NB42 609 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 FAM13CQ8NE31 585 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 HIPK4Q8NE63 616 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 OR2T12Q8NG77 320 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 BBS10Q8TAM1 723 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 MAL2Q969L2 176 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 SLC7A6OSQ96CW6 309 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-205ENST00000466897 MTHFD2LQ9H903 347 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-205ENST00000466897 SACM1LQ9NTJ5 587 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 FBXO34Q9NWN3 711 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 ANGPT4Q9Y264 503 aa13.94□□□□□ -0.18
NPHP4-205ENST00000466897 KLF13Q9Y2Y9 288 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-205ENST00000466897 PRAMEF25A6NGN4 478 aa13.93□□□□□ -0.18
NPHP4-205ENST00000466897 ALG1L2C9J202 215 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms