RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TRPV3Q8NET8 790 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 FBXO30Q8TB52 745 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 UBTD2Q8WUN7 234 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 TFB1MQ8WVM0 346 aaKnown RBP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 SELENOMQ8WWX9 145 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 C19orf43Q9BQ61 176 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 CCSER1Q9C0I3 900 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 RNF41Q9H4P4 317 aaPredicted RBP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 COQ10BQ9H8M1 238 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 ECT2Q9H8V3 914 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 ROPN1Q9HAT0 212 aaPredicted RBP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 SLC25A19Q9HC21 320 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 SDAD1Q9NVU7 687 aaKnown RBP eCLIP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 XPO7Q9UIA9 1087 aaKnown RBP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 MRTO4Q9UKD2 239 aaKnown RBP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 RAB26Q9ULW5 256 aa1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 MRPS2Q9Y399 296 aaKnown RBP1.68□□□□□ -2.14
GTF3C3-209ENST00000466862 ARHGAP21Q5T5U3 1957 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 A0A087WZY1 265 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 A0A0A6YYD4 124 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 TMEM89A2RUT3 159 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 TRIM64CA6NLI5 447 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 NME2P1O60361 137 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 TSPAN2O60636 221 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 EPOP01588 193 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 HSPA5P11021 654 aaKnown RBP1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 RALAP11233 206 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 FUT1P19526 365 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 PSMB1P20618 241 aaKnown RBP1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 FUT3P21217 361 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 IDSP22304 550 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 PTPN4P29074 926 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 PRDX2P32119 198 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 IFNAR2P48551 515 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 PPOXP50336 477 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 CCL11P51671 97 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 SLC7A2P52569 658 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 NLRP11P59045 1033 aaKnown RBP1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 GABPAQ06546 454 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 GABPB1Q06547 395 aaPredicted RBP1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 ELP6Q0PNE2 266 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 PDZK1IP1Q13113 114 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 NME3Q13232 169 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 SNX1Q13596 522 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 PDIA5Q14554 519 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 HEPACAMQ14CZ8 416 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 GPAT3Q53EU6 434 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 CMPK2Q5EBM0 449 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 IL23RQ5VWK5 629 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 TMEM26Q6ZUK4 368 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 ARMCX2Q7L311 632 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 BNIPLQ7Z465 357 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 ZNF573Q86YE8 665 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 LRRC17Q8N6Y2 441 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 BCORP1Q8N888 145 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 MINDY2Q8NBR6 621 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 GMCL1P1Q8NEA9 526 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 FAM71CQ8NEG0 241 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 DENND6BQ8NEG7 585 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 OR6M1Q8NGM8 313 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 FCGR1BQ92637 280 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 THRSPQ92748 146 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 IL22RA2Q969J5 263 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 RAB7BQ96AH8 199 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 RAB39BQ96DA2 213 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 MRPL53Q96EL3 112 aaKnown RBP1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 DTNBP1Q96EV8 351 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 RPGRIP1Q96KN7 1286 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 CXorf58Q96LI9 332 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 GPR137Q96N19 417 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 TXN2Q99757 166 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 COQ7Q99807 217 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 CRACR2AQ9BSW2 395 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 DPH7Q9BTV6 452 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 FUNDC2Q9BWH2 189 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 ZNF416Q9BWM5 594 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 CARD6Q9BX69 1037 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 NMNAT2Q9BZQ4 307 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 TRIM9Q9C026 710 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 NACA2Q9H009 215 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 GANQ9H2C0 597 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 RIBC2Q9H4K1 309 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 ACTR8Q9H981 624 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 VAT1LQ9HCJ6 419 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 CENPMQ9NSP4 180 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 DDX28Q9NUL7 540 aaKnown RBP1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 CNOT2Q9NZN8 540 aaKnown RBP1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 TMOD2Q9NZR1 351 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 DPM3Q9P2X0 92 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 IL20RAQ9UHF4 553 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 ENTPD4Q9Y227 616 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 RNF115Q9Y4L5 304 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 FLVCR1Q9Y5Y0 555 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 IKBKGQ9Y6K9 419 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 ATAD2BQ9ULI0 1458 aa1.67□□□□□ -2.14
GTF3C3-209ENST00000466862 SYNJ2BP-COX16A0A087WUM0 186 aa1.66□□□□□ -2.14
GTF3C3-209ENST00000466862 FAM230AA0A1W2PPH8 454 aa1.66□□□□□ -2.14
GTF3C3-209ENST00000466862 MEI4A8MW99 385 aa1.66□□□□□ -2.14
GTF3C3-209ENST00000466862 H0YCG3 227 aa1.66□□□□□ -2.14
GTF3C3-209ENST00000466862 CHEK1O14757 476 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms