RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 SLC25A24Q6NUK1 477 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 CCBE1Q6UXH8 406 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 ANKRD37Q7Z713 158 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 MARCH9Q86YJ5 346 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 DENND6BQ8NEG7 585 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 RFESDQ8TAC1 157 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 AGAP11Q8TF27 550 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 FAM222BQ8WU58 562 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 MYLPFQ96A32 169 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 RAB7BQ96AH8 199 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 CASD1Q96PB1 797 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 OPN3Q9H1Y3 402 aaPredicted RBP3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 DHX33Q9H6R0 707 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 TIGARQ9NQ88 270 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 RBM28Q9NW13 759 aaKnown RBP3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 EHFQ9NZC4 300 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 CRLS1Q9UJA2 301 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 DUSP12Q9UNI6 340 aa3.41□□□□□ -1.86
CDC42BPA-211ENST00000466538 FAM220BPB1ANY3 271 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 STX11O75558 287 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 VENTXO95231 258 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 MBD3O95983 291 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 JCHAINP01591 159 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 EPB41P11171 864 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 OR1D4P47884 311 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 NTHL1P78549 312 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 LPAL2Q16609 132 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 NADK2Q4G0N4 442 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 GALNT17Q6IS24 598 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 SCYL2Q6P3W7 929 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 HSD11B1LQ7Z5J1 315 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 PARGQ86W56 976 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 IFNEQ86WN2 208 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZSCAN4Q8NAM6 433 aaPredicted RBP3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 IL1F10Q8WWZ1 152 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 FOXN4Q96NZ1 517 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 APOL2Q9BQE5 337 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 HCAR1Q9BXC0 346 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 GSDMCQ9BYG8 508 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 CUTCQ9NTM9 273 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 MRPL39Q9NYK5 338 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 DHRS4-AS1Q9P1J3 65 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 MRPS7Q9Y2R9 242 aaKnown RBP3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 KIF16BQ96L93 1317 aa3.4□□□□□ -1.87
CDC42BPA-211ENST00000466538 A0A087WWV3 80 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZNF840PA6NDX5 716 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 A8MUI8 341 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 G3V3Y1 287 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 SLC17A2O00624 439 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 CTAGE5O15320 804 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 CT45A10P0DMU9 189 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 CLUP10909 449 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ANXA3P12429 323 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ACADSP16219 412 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 XRCC1P18887 633 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 DRD5P21918 477 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 DLSTP36957 453 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ALDH3B2P48448 385 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 CSRP3P50461 194 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 NUCB2P80303 420 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 COX10Q12887 443 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 IL18R1Q13478 541 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 CCDC57Q2TAC2 916 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 C15orf32Q32M92 178 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ANKDD1AQ495B1 522 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 LANCL3Q6ZV70 420 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 CYS1Q717R9 158 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ARMCX2Q7L311 632 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 PRSS48Q7RTY5 328 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 PPP1R42Q7Z4L9 355 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 MYPOPQ86VE0 399 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 GRAMD2AQ8IUY3 354 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZDHHC21Q8IVQ6 265 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 BPIFB2Q8N4F0 458 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZNF540Q8NDQ6 660 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 OR2T34Q8NGX1 318 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZNF671Q8TAW3 534 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 VN1R17PQ8TDU5 208 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 SPRYD4Q8WW59 207 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 TRIM44Q96DX7 344 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 DHTKD1Q96HY7 919 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 C4orf36Q96KX1 117 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 MCCC1Q96RQ3 725 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 POLR3FQ9H1D9 316 aaPredicted RBP3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 RMND5AQ9H871 391 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 CALHM2Q9HA72 323 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 PALMDQ9NP74 551 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 AATFQ9NY61 560 aaKnown RBP eCLIP3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 ARMCX1Q9P291 453 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 TMCC3Q9ULS5 477 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 SMC3Q9UQE7 1217 aa3.39□□□□□ -1.87
CDC42BPA-211ENST00000466538 POGZQ7Z3K3 1410 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 ATP10DQ9P241 1426 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 ZSCAN5CA6NGD5 496 aaPredicted RBP3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 EFCAB7A8K855 629 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 SRRM5B3KS81 715 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 PPIAL4DF5H284 164 aa3.38□□□□□ -1.87
CDC42BPA-211ENST00000466538 HBQ1P09105 142 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms