RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SNPHO15079 494 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 FADS1O60427 444 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 UTS2O95399 124 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 ANP32DO95626 131 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 ELAVL4P26378 380 aaKnown RBP13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 LCN1P31025 176 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 TRPC1P48995 793 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 GAS1P54826 345 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 HSF1Q00613 529 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 C6orf10Q5SRN2 563 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 DCST2Q5T1A1 773 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 CCNJQ5T5M9 372 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 GTF2H4Q92759 462 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 PHF12Q96QT6 1004 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 OR51I1Q9H343 314 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 ZNF385DQ9H6B1 395 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 ZNF703Q9H7S9 590 aaPredicted RBP13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 PLSCR2Q9NRY7 297 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 QPCTLQ9NXS2 382 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 OSGIN2Q9Y236 505 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 WIF1Q9Y5W5 379 aa13.26□□□□□ -0.29
SQSTM1-205ENST00000464493 ZNF407Q9C0G0 2248 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 GTF3C1Q12789 2109 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 NCKAP5O14513 1909 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 A0A1B0GTH9 108 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 KRT75O95678 551 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 AGR2O95994 175 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 IGHG3P01860 377 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 C1QCP02747 245 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 CELA3AP09093 270 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 ZCCHC18P0CG32 403 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 OR12D1P0DN82 309 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 CD1EP15812 388 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 ATP6V1C1P21283 382 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 TBXA2RP21731 343 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 GDF1P27539 372 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 GYS2P54840 703 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 GRAMD1BQ3KR37 738 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 SLC2A7Q6PXP3 512 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 DNAJC14Q6Y2X3 702 aaPredicted RBP13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 ZAR1Q86SH2 424 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 RNF130Q86XS8 419 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 PLCZ1Q86YW0 608 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 SPPL2CQ8IUH8 684 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 WDSUB1Q8N9V3 476 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 OR4C3Q8NH37 302 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 XAGE5Q8WWM1 108 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 UBQLN3Q9H347 655 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 ACKR4Q9NPB9 350 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 SLC52A3Q9NQ40 469 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 SDHAF3Q9NRP4 125 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 UBQLN4Q9NRR5 601 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 SLC6A13Q9NSD5 602 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 EXD2Q9NVH0 621 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 C15orf41Q9Y2V0 281 aa13.25□□□□□ -0.29
SQSTM1-205ENST00000464493 DNAJC13O75165 2243 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 FREM3P0C091 2139 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 A0A1W2PP18 115 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 SCO2O43819 266 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 SUSD5O60279 629 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 SLC19A2O60779 497 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 CBR3O75828 277 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 TRAPPC6AO75865 159 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 AK1P00568 194 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 NGFRP08138 427 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 HPGDP15428 266 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 CAPN3P20807 821 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 PTPN6P29350 595 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 KHKP50053 298 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 TXNL4AP83876 142 aaKnown RBP13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 TOMM20Q15388 145 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 ARHGAP11BQ3KRB8 267 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 ATAD3BQ5T9A4 648 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 OR5M10Q6IEU7 315 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 ARHGAP11AQ6P4F7 1023 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 TNFAIP8L2Q6P589 184 aaPredicted RBP13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 APOOLQ6UXV4 268 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 TRILQ7L0X0 811 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 C16orf62Q7Z3J2 963 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 MARCH3Q86UD3 253 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 CHERPQ8IWX8 916 aaKnown RBP13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 CHDHQ8NE62 594 aaPredicted RBP13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 PNPT1Q8TCS8 783 aaKnown RBP13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 ZFP90Q8TF47 636 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 DUSP19Q8WTR2 217 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 RAB8BQ92930 207 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 SDF2Q99470 211 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 TBL1XR1Q9BZK7 514 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 RTN4RQ9BZR6 473 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 HOXD1Q9GZZ0 328 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 PAIP1Q9H074 479 aaKnown RBP13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 LDAHQ9H6V9 325 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 MRGBPQ9NV56 204 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 PPP4R1LQ9P1A2 415 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 ZNF835Q9Y2P0 537 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 PCDHB14Q9Y5E9 798 aa13.24□□□□□ -0.29
SQSTM1-205ENST00000464493 A0A096LPI6 279 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 TRGV5A0A0B4J1U4 118 aa13.23□□□□□ -0.29
SQSTM1-205ENST00000464493 A0A1B0GVC2 190 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms