RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 ZNF781Q8N8C0 355 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 OR2T11Q8NH01 316 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 PAQR8Q8TEZ7 354 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 AKAP1Q92667 903 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNX17-205ENST00000464279 C11orf24Q96F05 449 aaPredicted RBP11.3□□□□□ -0.6
SNX17-205ENST00000464279 APIPQ96GX9 242 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 PRTFDC1Q9NRG1 225 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 MS4A12Q9NXJ0 267 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 HAO1Q9UJM8 370 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 LIPT1Q9Y234 373 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 MRPS33Q9Y291 106 aaKnown RBP11.3□□□□□ -0.6
SNX17-205ENST00000464279 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.3□□□□□ -0.6
SNX17-205ENST00000464279 TRRAPQ9Y4A5 3859 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 EML6Q6ZMW3 1958 aa11.3□□□□□ -0.6
SNX17-205ENST00000464279 NCKAP5O14513 1909 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 A0A1W2PNV4 684 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 NPIPB8E9PQR5 432 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 TGFBR3LH3BV60 316 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 KLF11O14901 512 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 ATP8B1O43520 1251 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 RGS14O43566 566 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 PCDH7O60245 1069 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 KIAA0513O60268 411 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 OR10H2O60403 315 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 ZNF354AO60765 605 aaPredicted RBP11.29□□□□□ -0.6
SNX17-205ENST00000464279 SKAP2O75563 359 aaPredicted RBP11.29□□□□□ -0.6
SNX17-205ENST00000464279 PRKRAO75569 313 aaKnown RBP11.29□□□□□ -0.6
SNX17-205ENST00000464279 TRAPPC6AO75865 159 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 TNFSF13O75888 250 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 SOD3P08294 240 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 NR2F6P10588 404 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 PRPH2P23942 346 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 PPP2R1BP30154 601 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 TIA1P31483 386 aaKnown RBP eCLIP11.29□□□□□ -0.6
SNX17-205ENST00000464279 BUD31P41223 144 aaPredicted RBP11.29□□□□□ -0.6
SNX17-205ENST00000464279 HSD17B7P56937 341 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 RAE1P78406 368 aaKnown RBP11.29□□□□□ -0.6
SNX17-205ENST00000464279 BTKQ06187 659 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 SLC13A2Q13183 592 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 ATG16L1Q676U5 607 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 C18orf63Q68DL7 685 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 GALNT18Q6P9A2 607 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 Q6ZSR9 355 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 KIRREL3Q8IZU9 778 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 ZFAND2BQ8WV99 257 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 WNT2BQ93097 391 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 ZNF597Q96LX8 424 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 SLC39A3Q9BRY0 314 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 RPF2Q9H7B2 306 aaKnown RBP11.29□□□□□ -0.6
SNX17-205ENST00000464279 ZNF696Q9H7X3 374 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 MANSC1Q9H8J5 431 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 ADAP2Q9NPF8 381 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 THAP1Q9NVV9 213 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 SIRT5Q9NXA8 310 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 TEX10Q9NXF1 929 aaPredicted RBP11.29□□□□□ -0.6
SNX17-205ENST00000464279 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 MCM8Q9UJA3 840 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 CLDN16Q9Y5I7 305 aa11.29□□□□□ -0.6
SNX17-205ENST00000464279 SLC35F4A4IF30 521 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 LSM1O15116 133 aaKnown RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 KLF4O43474 513 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 SSX4O60224 188 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 CTNSO60931 367 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 NDUFS7O75251 213 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 AIFM1O95831 613 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 TLX1P31314 330 aaPredicted RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 CDK9P50750 372 aaKnown RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 RPL14P50914 215 aaKnown RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 KIAA0040Q15053 153 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 XKR7Q5GH72 579 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 ZNF474Q6S9Z5 364 aaPredicted RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 CLNKQ7Z7G1 428 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 LRRC17Q8N6Y2 441 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 OR5L2Q8NGL0 311 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 ZNF75CPQ92670 426 aaPredicted RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 ABTB1Q969K4 478 aaPredicted RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 METTL2AQ96IZ6 378 aaKnown RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 CCT7Q99832 543 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 TUBA1CQ9BQE3 449 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 TMEM204Q9BSN7 226 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 DOHHQ9BU89 302 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 EBPLQ9BY08 206 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 PROK2Q9HC23 129 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 INTS9Q9NV88 658 aaKnown RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 C1orf109Q9NX04 203 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 MAPRE3Q9UPY8 281 aa11.28□□□□□ -0.6
SNX17-205ENST00000464279 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 PRKDCP78527 4128 aaKnown RBP11.28□□□□□ -0.6
SNX17-205ENST00000464279 SYNDIG1LA6NDD5 238 aa11.27□□□□□ -0.61
SNX17-205ENST00000464279 GLOD5A6NK44 160 aa11.27□□□□□ -0.61
SNX17-205ENST00000464279 FGF17O60258 216 aa11.27□□□□□ -0.61
SNX17-205ENST00000464279 LDB3O75112 727 aa11.27□□□□□ -0.61
SNX17-205ENST00000464279 GUCY1B2O75343 617 aa11.27□□□□□ -0.61
SNX17-205ENST00000464279 SEC22BO75396 215 aa11.27□□□□□ -0.61
SNX17-205ENST00000464279 JUNP05412 331 aaKnown RBP11.27□□□□□ -0.61
SNX17-205ENST00000464279 HPNP05981 417 aa11.27□□□□□ -0.61
SNX17-205ENST00000464279 KCNJ5P48544 419 aa11.27□□□□□ -0.61
SNX17-205ENST00000464279 TRA2BP62995 288 aaKnown RBP11.27□□□□□ -0.61
SNX17-205ENST00000464279 RNF4P78317 190 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms