RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ZNHIT3Q15649 155 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 RFTN2Q52LD8 501 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 EXOSC6Q5RKV6 272 aaKnown RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 KANK2Q63ZY3 851 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 OR5M10Q6IEU7 315 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 ZCCHC12Q6PEW1 402 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 ZNF551Q7Z340 670 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 TMEM200AQ86VY9 491 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 OR2M3Q8NG83 312 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 OR4K17Q8NGC6 315 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 CEP70Q8NHQ1 597 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 GOT1L1Q8NHS2 421 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 CDC26Q8NHZ8 85 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 APOPT1Q96IL0 206 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 SFXN2Q96NB2 322 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 ROPN1BQ9BZX4 212 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 IQCGQ9H095 443 aaKnown RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 DSN1Q9H410 356 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 ROPN1Q9HAT0 212 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 HHATLQ9HCP6 504 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 ACSS1Q9NUB1 689 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 PPP4R1LQ9P1A2 415 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 LGALS13Q9UHV8 139 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 TRAF6Q9Y4K3 522 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 PTGDR2Q9Y5Y4 395 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 EXPH5Q8NEV8 1989 aa8.29□□□□□ -1.08
BRCA1-207ENST00000461798 ANKRD17O75179 2603 aaKnown RBP8.29□□□□□ -1.08
BRCA1-207ENST00000461798 MED12Q93074 2177 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 ARHGAP21Q5T5U3 1957 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 TLDC2A0PJX2 215 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 TUBAL3A6NHL2 446 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 SMIM23A6NLE4 172 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 A6NNC1 897 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 A8MXE2 369 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 LSM1O15116 133 aaKnown RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 PDPK1O15530 556 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 CHEK2O96017 543 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 NGFRP08138 427 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 CD1EP15812 388 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 SDC1P18827 310 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 ALDH3A1P30838 453 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 LCN1P31025 176 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 GABRA3P34903 492 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 SERPINB5P36952 375 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 ASMTP46597 345 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 CLK3P49761 638 aaKnown RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 AGFG1P52594 562 aaKnown RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 DGKQP52824 942 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 IST1P53990 364 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 CLDN15P56746 228 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 EEFSECP57772 596 aaKnown RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 PRR5P85299 388 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 SRYQ05066 204 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 C17orf67Q0P5P2 114 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 SNTB1Q13884 538 aaKnown RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 GANABQ14697 944 aaKnown RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 MLC1Q15049 377 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 TMEM44Q2T9K0 475 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 VPS26BQ4G0F5 336 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 ZNF385BQ569K4 471 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 ARL13AQ5H913 290 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 OR2A2Q6IF42 318 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 LRIG3Q6UXM1 1119 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 CDRT4Q8N9R6 151 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 OR6Y1Q8NGX8 325 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 OR2W6PQ8NHA6 318 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 ZFP28Q8NHY6 868 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 FAM110BQ8TC76 370 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 DUSP19Q8WTR2 217 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 PPCDCQ96CD2 204 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 GIMAP5Q96F15 307 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 ZBED6CLQ96FA7 236 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 FOXC2Q99958 501 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 TMEM109Q9BVC6 243 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 POLDIP3Q9BY77 421 aaKnown RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 RTN4RQ9BZR6 473 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 CXXC4Q9H2H0 198 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 CLEC4MQ9H2X3 399 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 PIGMQ9H3S5 423 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 PTGES2Q9H7Z7 377 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 EML4Q9HC35 981 aaKnown RBP8.28□□□□□ -1.08
BRCA1-207ENST00000461798 FLRT3Q9NZU0 649 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 BAIAP2L1Q9UHR4 511 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 ATP6V1HQ9UI12 483 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 DKKL1Q9UK85 242 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 EDARQ9UNE0 448 aa8.28□□□□□ -1.08
BRCA1-207ENST00000461798 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 GXYLT2A0PJZ3 443 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 C17orf51A8MQB3 221 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 ALG1L2C9J202 215 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 EMC8O43402 210 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 SCO2O43819 266 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 TNFRSF21O75509 655 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 TNFSF13O75888 250 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 KCNH1O95259 989 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 UTS2O95399 124 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 TGM6O95932 706 aa8.27□□□□□ -1.09
BRCA1-207ENST00000461798 IGKV1D-16P01601 117 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms