RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 A0A0G2JNJ9 132 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 TRPC5OSA6NMA1 111 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 HDAC3O15379 428 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 CBR3O75828 277 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 ACP2P11117 423 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 ZFP36L2P47974 494 aaKnown RBP14.01□□□□□ -0.17
VARS-219ENST00000461328 CRYZQ08257 329 aaKnown RBP14.01□□□□□ -0.17
VARS-219ENST00000461328 LASP1Q14847 261 aaKnown RBP14.01□□□□□ -0.17
VARS-219ENST00000461328 OR5M10Q6IEU7 315 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 HDXQ7Z353 690 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 GALNT10Q86SR1 603 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 COX18Q8N8Q8 333 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 WDSUB1Q8N9V3 476 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 OR56A1Q8NGH5 318 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 NUDT8Q8WV74 236 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 NTNG2Q96CW9 530 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 COQ8BQ96D53 544 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 TBL1XR1Q9BZK7 514 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 ENKD1Q9H0I2 346 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 SDHAF3Q9NRP4 125 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 SIRT3Q9NTG7 399 aaPredicted RBP14.01□□□□□ -0.17
VARS-219ENST00000461328 FAM120CQ9NX05 1096 aaKnown RBP14.01□□□□□ -0.17
VARS-219ENST00000461328 FLRT3Q9NZU0 649 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 NTMQ9P121 344 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 Q9UFV3 132 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 FAF1Q9UNN5 650 aaPredicted RBP14.01□□□□□ -0.17
VARS-219ENST00000461328 CAMK2AQ9UQM7 478 aa14.01□□□□□ -0.17
VARS-219ENST00000461328 PHF3Q92576 2039 aaKnown RBP14.01□□□□□ -0.17
VARS-219ENST00000461328 GIMAP1-GIMAP5A0A087WTJ2 511 aa14□□□□□ -0.17
VARS-219ENST00000461328 GOLGA8QA0A0J9YX86 632 aa14□□□□□ -0.17
VARS-219ENST00000461328 GOLGA8OA6NCC3 632 aa14□□□□□ -0.17
VARS-219ENST00000461328 AHRRA9YTQ3 701 aa14□□□□□ -0.17
VARS-219ENST00000461328 GOLGA8NF8WBI6 632 aa14□□□□□ -0.17
VARS-219ENST00000461328 SLCO1B7G3V0H7 640 aa14□□□□□ -0.17
VARS-219ENST00000461328 SNNO75324 88 aaPredicted RBP14□□□□□ -0.17
VARS-219ENST00000461328 TOXO94900 526 aa14□□□□□ -0.17
VARS-219ENST00000461328 NKX2-2O95096 273 aa14□□□□□ -0.17
VARS-219ENST00000461328 UTS2O95399 124 aa14□□□□□ -0.17
VARS-219ENST00000461328 KRT16P08779 473 aa14□□□□□ -0.17
VARS-219ENST00000461328 SSTR2P30874 369 aa14□□□□□ -0.17
VARS-219ENST00000461328 ADH7P40394 386 aa14□□□□□ -0.17
VARS-219ENST00000461328 CCT3P49368 545 aaKnown RBP14□□□□□ -0.17
VARS-219ENST00000461328 C21orf58P58505 322 aa14□□□□□ -0.17
VARS-219ENST00000461328 DUSP5Q16690 384 aa14□□□□□ -0.17
VARS-219ENST00000461328 RIPPLY2Q5TAB7 128 aa14□□□□□ -0.17
VARS-219ENST00000461328 NXNQ6DKJ4 435 aa14□□□□□ -0.17
VARS-219ENST00000461328 OR4F3Q6IEY1 312 aa14□□□□□ -0.17
VARS-219ENST00000461328 ZCCHC12Q6PEW1 402 aa14□□□□□ -0.17
VARS-219ENST00000461328 FIGNL1Q6PIW4 674 aa14□□□□□ -0.17
VARS-219ENST00000461328 IFNEQ86WN2 208 aa14□□□□□ -0.17
VARS-219ENST00000461328 RIMKLAQ8IXN7 391 aa14□□□□□ -0.17
VARS-219ENST00000461328 PM20D2Q8IYS1 436 aa14□□□□□ -0.17
VARS-219ENST00000461328 LRRC34Q8IZ02 419 aa14□□□□□ -0.17
VARS-219ENST00000461328 SLC16A11Q8NCK7 471 aa14□□□□□ -0.17
VARS-219ENST00000461328 OR5AK3PQ8NH89 298 aa14□□□□□ -0.17
VARS-219ENST00000461328 SFXN5Q8TD22 340 aa14□□□□□ -0.17
VARS-219ENST00000461328 DYDC1Q8WWB3 177 aa14□□□□□ -0.17
VARS-219ENST00000461328 ABTB1Q969K4 478 aaPredicted RBP14□□□□□ -0.17
VARS-219ENST00000461328 GIMAP5Q96F15 307 aa14□□□□□ -0.17
VARS-219ENST00000461328 C16orf58Q96GQ5 468 aa14□□□□□ -0.17
VARS-219ENST00000461328 ATP6V1G3Q96LB4 118 aa14□□□□□ -0.17
VARS-219ENST00000461328 TIMP4Q99727 224 aa14□□□□□ -0.17
VARS-219ENST00000461328 CXorf36Q9H7Y0 433 aa14□□□□□ -0.17
VARS-219ENST00000461328 TAS2R10Q9NYW0 307 aa14□□□□□ -0.17
VARS-219ENST00000461328 FBXL2Q9UKC9 423 aa14□□□□□ -0.17
VARS-219ENST00000461328 PCDHGB4Q9UN71 923 aa14□□□□□ -0.17
VARS-219ENST00000461328 LRBAP50851 2863 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 SDHDO14521 159 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 HMGN2P05204 90 aaKnown RBP13.99□□□□□ -0.17
VARS-219ENST00000461328 BMP7P18075 431 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 SRD5A2P31213 254 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 CLNS1AP54105 237 aaKnown RBP13.99□□□□□ -0.17
VARS-219ENST00000461328 NME5P56597 212 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 POU6F2P78424 691 aaPredicted RBP13.99□□□□□ -0.17
VARS-219ENST00000461328 GRAMD1BQ3KR37 738 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 ACSF3Q4G176 576 aaPredicted RBP13.99□□□□□ -0.17
VARS-219ENST00000461328 VASNQ6EMK4 673 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 BHLHB9Q6PI77 547 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 CAMKMTQ7Z624 323 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 LURAP1LQ8IV03 231 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 WDR75Q8IWA0 830 aaKnown RBP13.99□□□□□ -0.17
VARS-219ENST00000461328 ZNF295-AS1Q8N0V1 137 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 OR4A15Q8NGL6 344 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 MOAP1Q96BY2 351 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 SFXN2Q96NB2 322 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 UGT2B28Q9BY64 529 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 OR2B2Q9GZK3 357 aa13.99□□□□□ -0.17
VARS-219ENST00000461328 NPDC1Q9NQX5 325 aaPredicted RBP13.99□□□□□ -0.17
VARS-219ENST00000461328 RPH3AQ9Y2J0 694 aaPredicted RBP13.99□□□□□ -0.17
VARS-219ENST00000461328 PKDREJQ9NTG1 2253 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 RNF103-CHMP3A0A140T963 221 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ENO4A6NNW6 628 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 C17orf51A8MQB3 221 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 FADS1O60427 444 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ACTL6AO96019 429 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 IGKV1D-16P01601 117 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 HPGDP15428 266 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ATP6V1C1P21283 382 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 DPP4P27487 766 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 MSX1P28360 303 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms