RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 NLGN3Q9NZ94 848 aa14.79□□□□□ -0.04
CMTM3-203ENST00000460097 TESQ9UGI8 421 aaKnown RBP14.79□□□□□ -0.04
CMTM3-203ENST00000460097 ANGPT4Q9Y264 503 aa14.79□□□□□ -0.04
CMTM3-203ENST00000460097 PRKAB1Q9Y478 270 aa14.79□□□□□ -0.04
CMTM3-203ENST00000460097 FAAHO00519 579 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 KPNA5O15131 536 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 RAB36O95755 333 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 IFNW1P05000 195 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 CELA2BP08218 269 aaPredicted RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 SLC2A2P11168 524 aaPredicted RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 NAT1P18440 290 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 AQP1P29972 269 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 RAE1P78406 368 aaKnown RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 CDK6Q00534 326 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 ILF3Q12906 894 aaKnown RBP eCLIP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 UNC5DQ6UXZ4 953 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 QSOX2Q6ZRP7 698 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 LRRTM4Q86VH4 590 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 RASGEF1AQ8N9B8 481 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 CCL4L1Q8NHW4 92 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 GPBAR1Q8TDU6 330 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 GTPBP3Q969Y2 492 aaKnown RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 MAP6Q96JE9 813 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 CAMK1GQ96NX5 476 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 DUSP23Q9BVJ7 150 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 POLDIP3Q9BY77 421 aaKnown RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 GSDMCQ9BYG8 508 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 PIGUQ9H490 435 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 CLEC2DQ9UHP7 191 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 PCOLCE2Q9UKZ9 415 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 GSTK1Q9Y2Q3 226 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 PCYT1BQ9Y5K3 369 aaPredicted RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 LYRM1O43325 122 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 RFPL3O75679 317 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 OR56A5P0C7T3 313 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 GIMD1P0DJR0 217 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 ABATP80404 500 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 DAB2P98082 770 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 HOXC5Q00444 222 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 IRF8Q02556 426 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 MRPL28Q13084 256 aaKnown RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 PDE7AQ13946 482 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 DEFB133Q30KQ1 61 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 TMEM220Q6QAJ8 160 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 TRAPPC5Q8IUR0 188 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 C9orf62Q8N4C0 152 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 OR4C6Q8NH72 309 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 APOBEC4Q8WW27 367 aaKnown RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 AKAP1Q92667 903 aaKnown RBP eCLIP14.78□□□□□ -0.042e-6■■■□□ 17.2
CMTM3-203ENST00000460097 MTERF3Q96E29 417 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 ZNF514Q96K75 400 aaPredicted RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 QRFPRQ96P65 431 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 TEFMQ96QE5 360 aaKnown RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 KATNB1Q9BVA0 655 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 TSSK6Q9BXA6 273 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 FGF20Q9NP95 211 aaPredicted RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 ADAM30Q9UKF2 790 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 GPR34Q9UPC5 381 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 SF3B6Q9Y3B4 125 aaKnown RBP14.78□□□□□ -0.04
CMTM3-203ENST00000460097 PLEKHM1Q9Y4G2 1056 aa14.78□□□□□ -0.04
CMTM3-203ENST00000460097 CEP250Q9BV73 2442 aa14.77□□□□□ -0.04
CMTM3-203ENST00000460097 FAM240BA0A1B0GVZ2 78 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 PLD2O14939 933 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 ATP1B2P14415 290 aaPredicted RBP14.77□□□□□ -0.05
CMTM3-203ENST00000460097 ARSBP15848 533 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 CSRP1P21291 193 aaKnown RBP14.77□□□□□ -0.05
CMTM3-203ENST00000460097 GALP22466 123 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 TIA1P31483 386 aaKnown RBP eCLIP14.77□□□□□ -0.053e-6■■■□□ 18.3
CMTM3-203ENST00000460097 GABRA5P31644 462 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 CCR7P32248 378 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 CRATP43155 626 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 GSTM5P46439 218 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 SMIM11AP58511 58 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 B4GALNT1Q00973 533 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 COX10Q12887 443 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 DSG2Q14126 1118 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 NDUFA9Q16795 377 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 KLHL22Q53GT1 634 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 CASP12Q6UXS9 341 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 UTS2BQ765I0 119 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 TRILQ7L0X0 811 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 LAPTM4BQ86VI4 370 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 NRROSQ86YC3 692 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 Q8N402 240 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 LINC00471Q8N535 108 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.77□□□□□ -0.05
CMTM3-203ENST00000460097 ZBED6CLQ96FA7 236 aaPredicted RBP14.77□□□□□ -0.05
CMTM3-203ENST00000460097 REEP4Q9H6H4 257 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 DLL3Q9NYJ7 618 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 GLTPQ9NZD2 209 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 GULP1Q9UBP9 304 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 SLC22A14Q9Y267 594 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 CDH10Q9Y6N8 788 aa14.77□□□□□ -0.05
CMTM3-203ENST00000460097 LRP4O75096 1905 aa14.76□□□□□ -0.05
CMTM3-203ENST00000460097 PRAMEF33A0A0G2JMD5 474 aa14.76□□□□□ -0.05
CMTM3-203ENST00000460097 TRDV1A0A1B0GX56 115 aa14.76□□□□□ -0.05
CMTM3-203ENST00000460097 OR2AG2A6NM03 316 aa14.76□□□□□ -0.05
CMTM3-203ENST00000460097 M0R129 80 aa14.76□□□□□ -0.05
CMTM3-203ENST00000460097 SIGLEC6O43699 453 aa14.76□□□□□ -0.05
CMTM3-203ENST00000460097 PRAMEF10O60809 474 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms