RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ZNF583Q96ND8 569 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 TAAR9Q96RI9 348 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 VPS4AQ9UN37 437 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 CEP295Q9C0D2 2601 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 FAM47E-STBD1D6RA91 191 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 UPK1AO00322 258 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 CLDN4O14493 209 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 OR10H2O60403 315 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 NOL3O60936 208 aaKnown RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 SNRNP70P08621 437 aaKnown RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 SSTR4P31391 388 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 CHI3L1P36222 383 aaPredicted RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 WNT5AP41221 380 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 GSK3BP49841 420 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 TSPAN5P62079 268 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 DUSP8Q13202 625 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 NSDHLQ15738 373 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 CEBPEQ15744 281 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 YOD1Q5VVQ6 348 aaPredicted RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 TNFAIP8L2Q6P589 184 aaPredicted RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 BRICD5Q6PL45 260 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 CEACAM20Q6UY09 585 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 LHFPL2Q6ZUX7 228 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 OVCH1Q7RTY7 1134 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 C6orf120Q7Z4R8 191 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 ZNF595Q8IYB9 648 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 PRR18Q8N4B5 295 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 CELF2-AS1Q8N7Q2 184 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 FAM13CQ8NE31 585 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 OR5D16Q8NGK9 328 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 WDR36Q8NI36 951 aaKnown RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 NINJ1Q92982 152 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 DACH2Q96NX9 599 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 HOPXQ9BPY8 73 aaPredicted RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 VCX3AQ9NNX9 186 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 ACSS1Q9NUB1 689 aaPredicted RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 ZCCHC3Q9NUD5 404 aaKnown RBP9.61□□□□□ -0.87
USP39-210ENST00000459775 GIMAP4Q9NUV9 329 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 KLHL9Q9P2J3 617 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 IL19Q9UHD0 177 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 L3MBTL1Q9Y468 752 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 KCNE3Q9Y6H6 103 aa9.61□□□□□ -0.87
USP39-210ENST00000459775 IDSB3KWA1 339 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 OXSR1O95747 527 aaPredicted RBP9.6□□□□□ -0.87
USP39-210ENST00000459775 QDPRP09417 244 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 F8A1P23610 371 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 CRATP43155 626 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 OCA2Q04671 838 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 ZNF267Q14586 743 aaPredicted RBP9.6□□□□□ -0.87
USP39-210ENST00000459775 TGIF1Q15583 401 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 PRICKLE4Q2TBC4 344 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 ZNF628Q5EBL2 1059 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 FDX2Q6P4F2 183 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 FAM198BQ6UWH4 519 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 MSANTD1Q6ZTZ1 278 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 TMPRSS7Q7RTY8 843 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 HMGN2P46Q86SG4 172 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 FBXW8Q8N3Y1 598 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 NATD1Q8N6N6 113 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 ZNF764Q96H86 408 aaPredicted RBP9.6□□□□□ -0.87
USP39-210ENST00000459775 PHF12Q96QT6 1004 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 SPSB2Q99619 263 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 DHRS9Q9BPW9 319 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 ECSITQ9BQ95 431 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 CNPPD1Q9BV87 410 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 SPRY4Q9C004 299 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 EPS8L2Q9H6S3 715 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 KAT8Q9H7Z6 458 aaKnown RBP9.6□□□□□ -0.87
USP39-210ENST00000459775 MKKSQ9NPJ1 570 aaPredicted RBP9.6□□□□□ -0.87
USP39-210ENST00000459775 MAT2BQ9NZL9 334 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 ABCD2Q9UBJ2 740 aa9.6□□□□□ -0.87
USP39-210ENST00000459775 IGKV3D-11A0A0A0MRZ8 115 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 ADAM11O75078 769 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 HMGN2P05204 90 aaKnown RBP9.59□□□□□ -0.87
USP39-210ENST00000459775 KLK3P07288 261 aaPredicted RBP9.59□□□□□ -0.87
USP39-210ENST00000459775 TNNI3P19429 210 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 SLC5A2P31639 672 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 RNF144AP50876 292 aaPredicted RBP9.59□□□□□ -0.87
USP39-210ENST00000459775 GZMMP51124 257 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 KCNJ10P78508 379 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 LASP1Q14847 261 aaKnown RBP9.59□□□□□ -0.87
USP39-210ENST00000459775 RGNQ15493 299 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 ADRM1Q16186 407 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 CYP2R1Q6VVX0 501 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 GPR155Q7Z3F1 870 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 LSRQ86X29 649 aaPredicted RBP9.59□□□□□ -0.87
USP39-210ENST00000459775 ALDH16A1Q8IZ83 802 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 HORMAD2Q8N7B1 307 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 OR10Q1Q8NGQ4 319 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 THAP3Q8WTV1 239 aaPredicted RBP9.59□□□□□ -0.87
USP39-210ENST00000459775 PTPMT1Q8WUK0 201 aaPredicted RBP9.59□□□□□ -0.87
USP39-210ENST00000459775 METTL21AQ8WXB1 218 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 RIT1Q92963 219 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 OR1F2PQ96R84 312 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 CXorf21Q9HAI6 301 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 ADAP2Q9NPF8 381 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 PRDM9Q9NQV7 894 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 RHBDL2Q9NX52 303 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 ACTR3BQ9P1U1 418 aa9.59□□□□□ -0.87
USP39-210ENST00000459775 C3orf18Q9UK00 162 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms