RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 MAP3K8P41279 467 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 POLR2JP52435 117 aaKnown RBP9.22□□□□□ -0.93
RFX3-210ENST00000457373 POU6F2P78424 691 aaPredicted RBP9.22□□□□□ -0.93
RFX3-210ENST00000457373 MRPS22P82650 360 aaKnown RBP9.22□□□□□ -0.93
RFX3-210ENST00000457373 SRSF1Q07955 248 aaKnown RBP eCLIP9.22□□□□□ -0.93
RFX3-210ENST00000457373 SLC10A1Q14973 349 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 TOMM20Q15388 145 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 HYAL4Q2M3T9 481 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 CCNJQ5T5M9 372 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 C1QL3Q5VWW1 255 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 CDC73Q6P1J9 531 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 BNC2Q6ZN30 1099 aaPredicted RBP9.22□□□□□ -0.93
RFX3-210ENST00000457373 COX18Q8N8Q8 333 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 OR9I1Q8NGQ6 314 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 OR1J4Q8NGS1 313 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 SFXN5Q8TD22 340 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 HOXB13Q92826 284 aaPredicted RBP9.22□□□□□ -0.93
RFX3-210ENST00000457373 RNF166Q96A37 237 aaPredicted RBP9.22□□□□□ -0.93
RFX3-210ENST00000457373 TMEM41AQ96HV5 264 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 GNRHR2Q96P88 292 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 OR7D2Q96RA2 312 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 PANX1Q96RD7 426 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 INPP5KQ9BT40 448 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 PIGUQ9H490 435 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 EXO5Q9H790 373 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 SDR39U1Q9NRG7 319 aaPredicted RBP9.22□□□□□ -0.93
RFX3-210ENST00000457373 GPATCH2Q9NW75 528 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 FBXO34Q9NWN3 711 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 FLRT3Q9NZU0 649 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 BTNL2Q9UIR0 455 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 LIPGQ9Y5X9 500 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 KCNE3Q9Y6H6 103 aa9.22□□□□□ -0.93
RFX3-210ENST00000457373 TRAPPC6AO75865 159 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 KCNK2O95069 426 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 AGFG2O95081 481 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 UTS2O95399 124 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 ANP32DO95626 131 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 KRT16P08779 473 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 PTGS2P35354 604 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 CHI3L1P36222 383 aaPredicted RBP9.21□□□□□ -0.94
RFX3-210ENST00000457373 MDH1P40925 334 aaKnown RBP9.21□□□□□ -0.94
RFX3-210ENST00000457373 CDKN2CP42773 168 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 ZFP36L2P47974 494 aaKnown RBP9.21□□□□□ -0.94
RFX3-210ENST00000457373 TRPC1P48995 793 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 MAN2A2P49641 1150 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 CLK3P49761 638 aaKnown RBP9.21□□□□□ -0.94
RFX3-210ENST00000457373 RPS26P62854 115 aaKnown RBP9.21□□□□□ -0.94
RFX3-210ENST00000457373 SNTA1Q13424 505 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 C3AR1Q16581 482 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 EXOSC6Q5RKV6 272 aaKnown RBP9.21□□□□□ -0.94
RFX3-210ENST00000457373 FNDC7Q5VTL7 733 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 TIGD3Q6B0B8 471 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 OR5M10Q6IEU7 315 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 TMEM81Q6P7N7 255 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 BHLHB9Q6PI77 547 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 ZNF621Q6ZSS3 439 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 FJX1Q86VR8 437 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 SPPL2CQ8IUH8 684 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 OR5D16Q8NGK9 328 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 FAM110BQ8TC76 370 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 CCDC115Q96NT0 180 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 STACQ99469 402 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 SLC35A5Q9BS91 424 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 TMEM120AQ9BXJ8 343 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 OR51I1Q9H343 314 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 PIF1Q9H611 641 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 ZNF703Q9H7S9 590 aaPredicted RBP9.21□□□□□ -0.94
RFX3-210ENST00000457373 ZDHHC11Q9H8X9 412 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 FGFR1OP2Q9NVK5 253 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 B4GALT7Q9UBV7 327 aa9.21□□□□□ -0.94
RFX3-210ENST00000457373 SPTA1P02549 2419 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 TRGV5A0A0B4J1U4 118 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 FAM234BA2RU67 622 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 CCDC154A6NI56 674 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 C17orf51A8MQB3 221 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 NPIPA2E9PIF3 369 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 NPIPA3F8WFD2 350 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 RFXANKO14593 260 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 LRRTM2O43300 516 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 FADS1O60427 444 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 SLC19A2O60779 497 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 C1QCP02747 245 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 TPOP07202 933 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 STSP08842 583 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 OR12D1P0DN82 309 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 TROVE2P10155 538 aaKnown RBP eCLIP9.2□□□□□ -0.94
RFX3-210ENST00000457373 ATF4P18848 351 aaPredicted RBP9.2□□□□□ -0.94
RFX3-210ENST00000457373 PTPN6P29350 595 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 ARFIP2P53365 341 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 CASP6P55212 293 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 STX5Q13190 355 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 UBAP2LQ14157 1087 aaKnown RBP9.2□□□□□ -0.94
RFX3-210ENST00000457373 GRAMD1BQ3KR37 738 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 TIGD2Q4W5G0 525 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 AGKQ53H12 422 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 DCST2Q5T1A1 773 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 TRILQ7L0X0 811 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 FGD2Q7Z6J4 655 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
RFX3-210ENST00000457373 YRDCQ86U90 279 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms