RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 TSTA3Q13630 321 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KIR2DS5Q14953 304 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ABRAXAS2Q15018 415 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ELOCQ15369 112 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KIF19Q2TAC6 998 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 LSM12Q3MHD2 195 aaKnown RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF528Q3MIS6 628 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 GGTA1PQ4G0N0 100 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 SGO1Q5FBB7 561 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 XKR7Q5GH72 579 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 XKR6Q5GH73 641 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 TCHHL1Q5QJ38 904 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM198Q66K66 360 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 LCTLQ6UWM7 567 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 RNF165Q6ZSG1 346 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 Q6ZSR9 355 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCDC121Q6ZUS5 278 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 HIST3H2AQ7L7L0 130 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 YTHDF3Q7Z739 585 aaKnown RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 DTX2Q86UW9 622 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 SFTPA2Q8IWL1 248 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 DDIASQ8IXT1 998 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 LAS2Q8IYD9 372 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ADGRF3Q8IZF5 1079 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 NAGSQ8N159 534 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 KDM8Q8N371 416 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 FBXW8Q8N3Y1 598 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 RAB42Q8N4Z0 105 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 CPSF7Q8N684 471 aaKnown RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ABHD11Q8NFV4 315 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR4E2Q8NGC2 313 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR52E1Q8NGJ3 308 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 LMX1AQ8TE12 382 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC5A11Q8WWX8 675 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 LCN9Q8WX39 176 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 PATE1Q8WXA2 126 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 AKAP1Q92667 903 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 NEIL2Q969S2 332 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 MIB2Q96AX9 1013 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 CXorf40BQ96DE9 158 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 C19orf60Q96EN9 201 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 HAUS8Q9BT25 410 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 IFT27Q9BW83 186 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 NMUR2Q9GZQ4 415 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 PCBD2Q9H0N5 130 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 EHD1Q9H4M9 534 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 XKR8Q9H6D3 395 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZFP64Q9NPA5 681 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 FARSBQ9NSD9 589 aaKnown RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM74BQ9NUR3 256 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR6C2Q9NZP2 312 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 NTMQ9P121 344 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 NLKQ9UBE8 527 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 SPASTQ9UBP0 616 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 APOBEC3BQ9UH17 382 aaKnown RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 GMEB2Q9UKD1 530 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 PILRBQ9UKJ0 227 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF490Q9ULM2 529 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 ICKQ9UPZ9 632 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 SH2B3Q9UQQ2 575 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 BTRCQ9Y297 605 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 CARD8Q9Y2G2 431 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 WBP11Q9Y2W2 641 aaKnown RBP4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 PTGDR2Q9Y5Y4 395 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 USP34Q70CQ2 3546 aa4.85□□□□□ -1.63
HMGB1P4-201ENST00000455362 A0A0B4J293 547 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 MCIDASD6RGH6 385 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 E9PBE3 544 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 H0YIV9 168 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC28A1O00337 649 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 BTN3A3O00478 584 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 UBDO15205 165 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 AQP9O43315 295 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 RGS14O43566 566 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 KIF1CO43896 1103 aaKnown RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 AKR7A3O95154 331 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 MT-ATP6P00846 226 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 PDYNP01213 254 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 FESP07332 822 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 CYC1P08574 325 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 FCGR2AP12318 317 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 CDH1P12830 882 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 GNSP15586 552 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 LBPP18428 481 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ITGAXP20702 1163 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 EEF1B2P24534 225 aaKnown RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SHMT2P34897 504 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ASMTP46597 345 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCR8P51685 355 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 HNRNPH2P55795 449 aaKnown RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 OCA2Q04671 838 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF33BQ06732 778 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 PRDX1Q06830 199 aaKnown RBP4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ACSM1Q08AH1 577 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 BNIP1Q12981 228 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 GPR18Q14330 331 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 GAMTQ14353 236 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 ANGPT1Q15389 498 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SHBQ15464 509 aa4.84□□□□□ -1.63
HMGB1P4-201ENST00000455362 SGCBQ16585 318 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms