RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 RNPEPL1Q9HAU8 725 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 MAGEL2Q9UJ55 1249 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 GPC6Q9Y625 555 aaPredicted RBP10.13□□□□□ -0.79
SCN9A-205ENST00000454569 DSPPQ9NZW4 1301 aa10.13□□□□□ -0.79
SCN9A-205ENST00000454569 MPDZO75970 2070 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 FRG2CA6NGY1 282 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 OR6C76A6NM76 312 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 H3BNX3 289 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 SIAH2O43255 324 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 TSPAN2O60636 221 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 FKBP6O75344 327 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 PRKD3O94806 890 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 MFN2O95140 757 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 HPP00738 406 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 MT-ND1P03886 318 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 ADRB1P08588 477 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 CD247P20963 164 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 FUT4P22083 530 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 MAGEA8P43361 318 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 ZNHIT3Q15649 155 aaPredicted RBP10.12□□□□□ -0.79
SCN9A-205ENST00000454569 CYBRD1Q53TN4 286 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 CRB2Q5IJ48 1285 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 APOOLQ6UXV4 268 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 LRRC74BQ6ZQY2 392 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 CBLL1Q75N03 491 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 TSEN54Q7Z6J9 526 aaKnown RBP10.12□□□□□ -0.79
SCN9A-205ENST00000454569 SPATA24Q86W54 205 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 PROSER1Q86XN7 944 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 ADGRG5Q8IZF4 528 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 SIRT6Q8N6T7 355 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 OR4D11Q8NGI4 311 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 OR4C3Q8NH37 302 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 SLC26A7Q8TE54 656 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 KIAA1143Q96AT1 154 aaPredicted RBP10.12□□□□□ -0.79
SCN9A-205ENST00000454569 COL21A1Q96P44 957 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 SEPHS2Q99611 448 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 SAP130Q9H0E3 1048 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 BCL2L10Q9HD36 194 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 MMP25Q9NPA2 562 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 EXD2Q9NVH0 621 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 MYOTQ9UBF9 498 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 LIPT1Q9Y234 373 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 WDR45Q9Y484 360 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 OR10H1Q9Y4A9 318 aa10.12□□□□□ -0.79
SCN9A-205ENST00000454569 A0A0G2JPF8 293 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 SYNDIG1LA6NDD5 238 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 HNRNPCL2B2RXH8 293 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 HNRNPCL3B7ZW38 293 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 C5orf58C9J3I9 102 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 NPIPB9F8W1W9 429 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ADAM10O14672 748 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 TO15178 435 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 KLK10O43240 276 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 UGT2B17O75795 530 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 OR2J2O76002 312 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ZFAND5O76080 213 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF682O95780 498 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ALPPP05187 535 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 C8BP07358 591 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 HNRNPCL4P0DMR1 293 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ABCD3P28288 659 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 CRISP3P54108 245 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 AP2B1P63010 937 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 RHDQ02161 417 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 EXT1Q16394 746 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 DCAF10Q5QP82 559 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ATAD3BQ5T9A4 648 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF468Q5VIY5 522 aaPredicted RBP10.11□□□□□ -0.79
SCN9A-205ENST00000454569 HLA-DQA1Q5Y7H0 255 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 AP1ARQ63HQ0 302 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 AAGABQ6PD74 315 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 RAB43Q86YS6 212 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 RBM45Q8IUH3 476 aaKnown RBP10.11□□□□□ -0.79
SCN9A-205ENST00000454569 LACC1Q8IV20 430 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 CLIP4Q8N3C7 705 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 NUBPLQ8TB37 319 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 BRIX1Q8TDN6 353 aaKnown RBP10.11□□□□□ -0.79
SCN9A-205ENST00000454569 OMA1Q96E52 524 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 TPD52L3Q96J77 140 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ADOQ96SZ5 270 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 KLHDC3Q9BQ90 382 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 DEFB126Q9BYW3 111 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 MUC13Q9H3R2 512 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 CDCP1Q9H5V8 836 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ZBTB20Q9HC78 741 aaPredicted RBP10.11□□□□□ -0.79
SCN9A-205ENST00000454569 Q9N2J8 555 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 RLIMQ9NVW2 624 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 NKX1-2Q9UD57 310 aaPredicted RBP10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ANGPT4Q9Y264 503 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 CFL2Q9Y281 166 aa10.11□□□□□ -0.79
SCN9A-205ENST00000454569 ANKRD11Q6UB99 2663 aaPredicted RBP10.11□□□□□ -0.79
SCN9A-205ENST00000454569 PTPRQQ9UMZ3 2332 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 MED12Q93074 2177 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 ARGFXA6NJG6 315 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 AQP12BA6NM10 295 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 PCDH17O14917 1159 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 KIAA0513O60268 411 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 UGT2B11O75310 529 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 STX11O75558 287 aa10.1□□□□□ -0.79
SCN9A-205ENST00000454569 REM1O75628 298 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms