RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SEMA7AO75326 666 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 GPX5O75715 221 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 NCR1O76036 304 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 F3P13726 295 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 MTNR1AP48039 350 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 PCBP4P57723 403 aaKnown RBP11.21□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF57Q68EA5 555 aaPredicted RBP11.21□□□□□ -0.62
SMPD4-213ENST00000454468 TMEM92Q6UXU6 159 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 ABHD13Q7L211 337 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 KLBQ86Z14 1044 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 PARP16Q8N5Y8 322 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 FAM98AQ8NCA5 519 aaKnown RBP11.21□□□□□ -0.62
SMPD4-213ENST00000454468 ANKK1Q8NFD2 765 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 RSC1A1Q92681 617 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 SLC41A3Q96GZ6 507 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 PTCHD1Q96NR3 888 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 TRNT1Q96Q11 434 aaKnown RBP11.21□□□□□ -0.62
SMPD4-213ENST00000454468 ACTRT3Q9BYD9 372 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 PRRG3Q9BZD7 231 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 OR6C2Q9NZP2 312 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 A4GNTQ9UNA3 340 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 GTF2A1LQ9UNN4 478 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 CFL2Q9Y281 166 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 TNFP01375 233 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 MAZP56270 477 aaKnown RBP11.21□□□□□ -0.62
SMPD4-213ENST00000454468 HHEXQ03014 270 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 SLC3A1Q07837 685 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 RUNX2Q13950 521 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 INAVAQ3KP66 663 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 FBXO43Q4G163 708 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 STEAP3Q658P3 488 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 MARCH9Q86YJ5 346 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF566Q969W8 418 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 CPNE7Q9UBL6 633 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 GSTK1Q9Y2Q3 226 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 ASB4Q9Y574 426 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 PEX16Q9Y5Y5 336 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 AP1M2Q9Y6Q5 423 aa11.21□□□□□ -0.62
SMPD4-213ENST00000454468 TRAV27A0A087WT01 109 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 CXorf51AA0A1B0GTR3 108 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SLC30A4O14863 429 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ASNA1O43681 348 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 CSO75390 466 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SEMG1P04279 462 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 PEBP1P30086 187 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SDC2P34741 201 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 PPP5CP53041 499 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 RPS15AP62244 130 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 EEF1A2Q05639 463 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 NFATC4Q14934 902 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 PUS10Q3MIT2 529 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 FLYWCH1Q4VC44 716 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 USP53Q70EK8 1073 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF367Q7RTV3 350 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 NATD1Q8N6N6 113 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ZNF655Q8N720 491 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 C9orf43Q8TAL5 461 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SLC38A3Q99624 504 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ZFYVE21Q9BQ24 234 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SLIRPQ9GZT3 109 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 AICDAQ9GZX7 198 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 HDHD2Q9H0R4 259 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ANKHQ9HCJ1 492 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 CRNNQ9UBG3 495 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 A0A0G2JPF8 293 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 FABP12A6NFH5 140 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 NOTOA8MTQ0 251 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 FAM171A2A8MVW0 826 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 HNRNPCL2B2RXH8 293 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 HNRNPCL3B7ZW38 293 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 PSMD9O00233 223 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 PROM1O43490 865 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 HNRNPCL4P0DMR1 293 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 NDUFS1P28331 727 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 TRHRP34981 398 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 TGFBR2P37173 567 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 RPS19P39019 145 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ETV5P41161 510 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ETV1P50549 477 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 TUBA1BP68363 451 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 INSL4Q14641 139 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ZNHIT3Q15649 155 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 DHRS4L2Q6PKH6 230 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 PLEKHG7Q6ZR37 379 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 TUBA1AQ71U36 451 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 RANBP3LQ86VV4 465 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 BBS1Q8NFJ9 593 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 LMX1AQ8TE12 382 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 MMABQ96EY8 250 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 CNDP2Q96KP4 475 aaKnown RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 PRRC1Q96M27 445 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 POU2F3Q9UKI9 436 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 CA14Q9ULX7 337 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.2□□□□□ -0.62
SMPD4-213ENST00000454468 CENPVL1A0A0U1RR11 272 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 AGAP5A6NIR3 686 aa11.2□□□□□ -0.62
SMPD4-213ENST00000454468 SLC9B1P1A6NJY1 282 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms