RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 FBLP22087 321 aaKnown RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 PTPN6P29350 595 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 PPP2R1BP30154 601 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 DDOSTP39656 456 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 UGT2B15P54855 530 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 TIGD6Q17RP2 521 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 CBLL1Q75N03 491 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 ZNF367Q7RTV3 350 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 GALNT5Q7Z7M9 940 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 CCDC190Q86UF4 302 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 P3H2Q8IVL5 708 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 CLECL1Q8IZS7 167 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 METTL27Q8N6F8 245 aaPredicted RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 OR4K14Q8NGD5 310 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 OR5P2Q8WZ92 322 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 RPL3LQ92901 407 aaKnown RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 INPP5KQ9BT40 448 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 RACGAP1Q9H0H5 632 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 ACSS1Q9NUB1 689 aaPredicted RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 OCIAD1Q9NX40 245 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 PDP1Q9P0J1 537 aaPredicted RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 ZNF282Q9UDV7 671 aaPredicted RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 CFL2Q9Y281 166 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 RBMX2Q9Y388 322 aaKnown RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 COL27A1Q8IZC6 1860 aaPredicted RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 M0R082 166 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 C6orf47O95873 294 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 FGF5P12034 268 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 CSNK2A2P19784 350 aaPredicted RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 PPIBP23284 216 aaKnown RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 RCVRNP35243 200 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 GGT2P36268 569 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 LIPAP38571 399 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 GCGRP47871 477 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 PDX1P52945 283 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 RPP38P78345 283 aaKnown RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 INSM1Q01101 510 aaPredicted RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 VEZF1Q14119 521 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 SPANXN2Q5MJ10 180 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 ZNF621Q6ZSS3 439 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 AHSA2Q719I0 299 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 CCDC103Q8IW40 242 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 UBQLNLQ8IYU4 475 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 DEPDC4Q8N2C3 294 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 DEFB124Q8NES8 71 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 APH1BQ8WW43 257 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 COL26A1Q96A83 441 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 DEPDC7Q96QD5 511 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 NDEL1Q9GZM8 345 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 C3orf14Q9HBI5 128 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 ZNF304Q9HCX3 659 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 NEUROD4Q9HD90 331 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 TAS2R9Q9NYW1 312 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 DHCR7Q9UBM7 475 aaKnown RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 CES1P1Q9UKY3 287 aa14.81□□□□□ -0.04
SNX17-204ENST00000453453 SAMHD1Q9Y3Z3 626 aaKnown RBP14.81□□□□□ -0.04
SNX17-204ENST00000453453 DMDP11532 3685 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 B4E171 279 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 CLDN4O14493 209 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 UGT2B17O75795 530 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 ABCB1P08183 1280 aaPredicted RBP14.8□□□□□ -0.04
SNX17-204ENST00000453453 GADD45AP24522 165 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 MPIP34949 423 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 TSPAN7P41732 249 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 FRKP42685 505 aaPredicted RBP14.8□□□□□ -0.04
SNX17-204ENST00000453453 RPS5P46782 204 aaKnown RBP14.8□□□□□ -0.04
SNX17-204ENST00000453453 NCBP2P52298 156 aaKnown RBP eCLIP14.8□□□□□ -0.04
SNX17-204ENST00000453453 PCBP4P57723 403 aaKnown RBP14.8□□□□□ -0.04
SNX17-204ENST00000453453 ARPC4P59998 168 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 COPZ1P61923 177 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 SIM1P81133 766 aaPredicted RBP14.8□□□□□ -0.04
SNX17-204ENST00000453453 MC2RQ01718 297 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 DSG2Q14126 1118 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 IRF3Q14653 427 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 MLC1Q15049 377 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 VMACQ2NL98 169 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.8□□□□□ -0.04
SNX17-204ENST00000453453 ARHGAP40Q5TG30 622 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 RHBDD2Q6NTF9 364 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 GDPD3Q7L5L3 318 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 ZNF595Q8IYB9 648 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 ENTHD1Q8IYW4 607 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 OR6F1Q8NGZ6 308 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 OR51Q1Q8NH59 317 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 GOT1L1Q8NHS2 421 aaPredicted RBP14.8□□□□□ -0.04
SNX17-204ENST00000453453 CLIP3Q96DZ5 547 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 PEX11GQ96HA9 241 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 C6orf62Q9GZU0 229 aaPredicted RBP14.8□□□□□ -0.04
SNX17-204ENST00000453453 NUAK2Q9H093 628 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 ABCG2Q9UNQ0 655 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 CORO2BQ9UQ03 480 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 U3KQV3 271 aa14.8□□□□□ -0.04
SNX17-204ENST00000453453 MYO15AQ9UKN7 3530 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 CLCA1A8K7I4 914 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 MYO1GB0I1T2 1018 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 CYR61O00622 381 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 DNAJB6O75190 326 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 MT-CO3P00414 261 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 SPNP16150 400 aa14.79□□□□□ -0.04
SNX17-204ENST00000453453 GPC1P35052 558 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms