RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TTC36A6NLP5 189 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 HCRTR2O43614 444 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 TYROBPO43914 113 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 ZNF500O60304 480 aaPredicted RBP11.29□□□□□ -0.6
CPSF4-208ENST00000452047 NKX2-2O95096 273 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 RCBTB2O95199 551 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 IGKV1D-16P01601 117 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 TMIGD3P0DMS9 266 aaPredicted RBP11.29□□□□□ -0.6
CPSF4-208ENST00000452047 PRPS2P11908 318 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 TCEA1P23193 301 aaKnown RBP11.29□□□□□ -0.6
CPSF4-208ENST00000452047 GABRA3P34903 492 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 AGFG1P52594 562 aaKnown RBP11.29□□□□□ -0.6
CPSF4-208ENST00000452047 DGKQP52824 942 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 FOXF2Q12947 444 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 STX5Q13190 355 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
CPSF4-208ENST00000452047 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 GALNTL6Q49A17 601 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 FLYWCH1Q4VC44 716 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 DDIASQ8IXT1 998 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 OR6Y1Q8NGX8 325 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 ZFP28Q8NHY6 868 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 PIK3R3Q92569 461 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 NRGNQ92686 78 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 WNT2BQ93097 391 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 MTERF3Q96E29 417 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 TM9SF2Q99805 663 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 SFXN3Q9BWM7 321 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 DSN1Q9H410 356 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 EML4Q9HC35 981 aaKnown RBP11.29□□□□□ -0.6
CPSF4-208ENST00000452047 EQTNQ9NQ60 294 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 ACSS1Q9NUB1 689 aaPredicted RBP11.29□□□□□ -0.6
CPSF4-208ENST00000452047 SH3BP4Q9P0V3 963 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 GIMAP2Q9UG22 337 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 MRTO4Q9UKD2 239 aaKnown RBP11.29□□□□□ -0.6
CPSF4-208ENST00000452047 MPDZO75970 2070 aa11.29□□□□□ -0.6
CPSF4-208ENST00000452047 IGLV3-32A0A0A0MS00 114 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 EEF1E1-BLOC1S5C9J1V9 151 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 EEF1E1O43324 174 aaKnown RBP11.28□□□□□ -0.6
CPSF4-208ENST00000452047 UTS2O95399 124 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 ACP2P11117 423 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 GPC1P35052 558 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 SERPINB5P36952 375 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 ETV4P43268 484 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 ASMTP46597 345 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 PSMD4P55036 377 aaKnown RBP11.28□□□□□ -0.6
CPSF4-208ENST00000452047 MANFP55145 182 aaKnown RBP11.28□□□□□ -0.6
CPSF4-208ENST00000452047 CLDN15P56746 228 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 PRR5P85299 388 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 SORDQ00796 357 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 GRAMD1BQ3KR37 738 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 EXOSC6Q5RKV6 272 aaKnown RBP11.28□□□□□ -0.6
CPSF4-208ENST00000452047 APOOLQ6UXV4 268 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 SPNS3Q6ZMD2 512 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 MARCH3Q86UD3 253 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 EXOC3L1Q86VI1 746 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 MREGQ8N565 214 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 CDRT4Q8N9R6 151 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 NUP43Q8NFH3 380 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 AGR3Q8TD06 166 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 FAM222BQ8WU58 562 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 LRRC46Q96FV0 321 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 RMND5BQ96G75 393 aaPredicted RBP11.28□□□□□ -0.6
CPSF4-208ENST00000452047 C3orf30Q96M34 536 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 MS4A4EQ96PG1 132 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 GPATCH1Q9BRR8 931 aaKnown RBP11.28□□□□□ -0.6
CPSF4-208ENST00000452047 TMEM109Q9BVC6 243 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 C3orf14Q9HBI5 128 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 SDHAF3Q9NRP4 125 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 SIRT3Q9NTG7 399 aaPredicted RBP11.28□□□□□ -0.6
CPSF4-208ENST00000452047 MED11Q9P086 117 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 ATP6V1HQ9UI12 483 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 ZDHHC2Q9UIJ5 367 aa11.28□□□□□ -0.6
CPSF4-208ENST00000452047 MED13LQ71F56 2210 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 OR2M5A3KFT3 312 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 A6NNC1 897 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 SCAMP2O15127 329 aaKnown RBP11.27□□□□□ -0.61
CPSF4-208ENST00000452047 TNFSF13O75888 250 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 KCNH1O95259 989 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 TGM6O95932 706 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 BPGMP07738 259 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 EFNA1P20827 205 aaPredicted RBP11.27□□□□□ -0.61
CPSF4-208ENST00000452047 DNAJA1P31689 397 aaKnown RBP11.27□□□□□ -0.61
CPSF4-208ENST00000452047 RFX3P48380 749 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 PRKAG1P54619 331 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 PTGR1Q14914 329 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 MLC1Q15049 377 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 DUSP5Q16690 384 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 VPS26BQ4G0F5 336 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 RAET1LQ5VY80 246 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 MFSD12Q6NUT3 480 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 LRIG3Q6UXM1 1119 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 R3HCC1LQ7Z5L2 792 aaKnown RBP11.27□□□□□ -0.61
CPSF4-208ENST00000452047 ZAR1Q86SH2 424 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 GRAMD2AQ8IUY3 354 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 GCNT2Q8N0V5 402 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 SLC16A11Q8NCK7 471 aa11.27□□□□□ -0.61
CPSF4-208ENST00000452047 CEP70Q8NHQ1 597 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms