RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 QRSL1Q9H0R6 528 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 POLR2J3Q9H1A7 115 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 C11orf49Q9H6J7 331 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 FGF20Q9NP95 211 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 UFSP2Q9NUQ7 469 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 AKAP7Q9P0M2 348 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 ZNF69Q9UC07 566 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 EXOSC1Q9Y3B2 195 aaKnown RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 GSAPA4D1B5 854 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 MTMR11A4FU01 709 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 C5orf52A6NGY3 159 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 TMEM200CA6NKL6 621 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 EREGO14944 169 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 SIAH2O43255 324 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 TSPAN3O60637 253 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 AKR7A3O95154 331 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 CLDN9O95484 217 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 C22orf31O95567 290 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 NFATC1O95644 943 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 IFNW1P05000 195 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 LIMS3P0CW19 117 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 LIMS4P0CW20 117 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 ACP2P11117 423 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 CNR1P21554 472 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 THBS2P35442 1172 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 GPX4P36969 197 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 TAF6P49848 677 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 MMP15P51511 669 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 ZNF280AP59817 542 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 E2F1Q01094 437 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 GAB1Q13480 694 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 DYRK1AQ13627 763 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 KLF9Q13886 244 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 SCARB2Q14108 478 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 TMEM132BQ14DG7 1078 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 RNF212Q495C1 297 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 MANEAQ5SRI9 462 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 SLC25A30Q5SVS4 291 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 NOXRED1Q6NXP6 359 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 UQCC3Q6UW78 93 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 ALKAL1Q6UXT8 129 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 SKA3Q8IX90 412 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 ARMC10Q8N2F6 343 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 SLC44A3Q8N4M1 653 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 ZNF485Q8NCK3 441 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 PIGKQ92643 395 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 FATE1Q969F0 183 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 PSMG2Q969U7 264 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 WDR89Q96FK6 387 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 ZFP3Q96NJ6 502 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 PFDN5Q99471 154 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 GPR20Q99678 358 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 WDR77Q9BQA1 342 aaPredicted RBP8.1□□□□□ -1.11
LSM5-208ENST00000450169 FUZQ9BT04 418 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 FAIM2Q9BWQ8 316 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 GSDMCQ9BYG8 508 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 OR10A4Q9H209 315 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 AKT3Q9Y243 479 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 RASD1Q9Y272 281 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 IRAK3Q9Y616 596 aa8.1□□□□□ -1.11
LSM5-208ENST00000450169 TMEM218A2RU14 115 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 OR2W5A6NFC9 320 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 ARGFXA6NJG6 315 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 DBX1A6NMT0 343 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 LRRN3E7EW58 273 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 DVL2O14641 736 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 CHST10O43529 356 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 OR10H3O60404 316 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 EFCAB14O75071 495 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 UBL3O95164 117 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 OAZ2O95190 189 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 ADH1AP07327 375 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 OR12D1P0DN82 309 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 LAMP1P11279 417 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 IFNGR1P15260 489 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 AMD1P17707 334 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PRPH2P23942 346 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 DDX6P26196 483 aaKnown RBP eCLIP8.09□□□□□ -1.11
LSM5-208ENST00000450169 PNPLA4P41247 253 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 CASP9P55211 416 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PITPNAQ00169 270 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 RELBQ01201 579 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 DEFA6Q01524 100 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 SMCO1Q147U7 214 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 SLC5A12Q1EHB4 618 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 UAP1L1Q3KQV9 507 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 MINDY4Q4G0A6 757 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 OR2B11Q5JQS5 317 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 ACER2Q5QJU3 275 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 ARTNQ5T4W7 220 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 SFRP4Q6FHJ7 346 aaPredicted RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 NHLRC1Q6VVB1 395 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 CIR1Q86X95 450 aaPredicted RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 CPXM2Q8N436 756 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 TEX26Q8N6G2 289 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 TMEM185AQ8NFB2 350 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 OR6K3Q8NGY3 331 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 OR51Q1Q8NH59 317 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 NFKBIDQ8NI38 313 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 TRMT10AQ8TBZ6 339 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms