RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 XCR1P46094 333 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 CCR8P51685 355 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 PNLIPRP1P54315 467 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 WNT3P56703 355 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 TLE2Q04725 743 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 SIGLEC14Q08ET2 396 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 SGCGQ13326 291 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ILKQ13418 452 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 TCTE1Q5JU00 501 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 HAGHLQ6PII5 290 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 LRRTM4Q86VH4 590 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 KIAA1958Q8N8K9 716 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ZDHHC1Q8WTX9 485 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 SFXN2Q96NB2 322 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF559Q9BR84 538 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 DPH7Q9BTV6 452 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 PDFQ9HBH1 243 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 DMRT3Q9NQL9 472 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 RPN2P04844 631 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 TYRP14679 529 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 NDUFV2P19404 249 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 CR2P20023 1033 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 AP3S2P59780 193 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 DGCR2P98153 550 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 RGS1Q08116 209 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 OPCMLQ14982 345 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 FAM198BQ6UWH4 519 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 GET4Q7L5D6 327 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 TECPR1Q7Z6L1 1165 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 TAF8Q7Z7C8 310 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 TMPRSS12Q86WS5 348 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 CLDN22Q8N7P3 220 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 RASGEF1AQ8N9B8 481 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 GATSQ8NAP1 163 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ACOT12Q8WYK0 555 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF354BQ96LW1 612 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF558Q96NG5 402 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 DCLRE1CQ96SD1 692 aaKnown RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 MS4A7Q9GZW8 240 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 AKAP7Q9P0M2 348 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 NOP16Q9Y3C1 178 aaKnown RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ELOA3DA6NLF2 546 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF879B4DU55 563 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 SCN2BO60939 215 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 EPHA5P54756 1037 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 NDUFA9Q16795 377 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ELOA3BQ3SY89 546 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 APOOLQ6UXV4 268 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 UBE2Q1Q7Z7E8 422 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 OAFQ86UD1 273 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 L3MBTL4Q8NA19 623 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ELOA3Q8NG57 546 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 FANK1Q8TC84 345 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 GNPDA2Q8TDQ7 276 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 PPP1R16AQ96I34 528 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ACOXLQ9NUZ1 547 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 TRAV27A0A087WT01 109 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ACOD1A6NK06 481 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 AGPAT2O15120 278 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 CREBL2O60519 120 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PRAMEF4O60810 478 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 FURINP09958 794 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 CXCL3P19876 107 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 C6orf132Q5T0Z8 1188 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PRAMEF9Q5VWM5 478 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 RELL2Q8NC24 303 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 RBPMSQ93062 196 aaKnown RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 SRA1Q9HD15 236 aaKnown RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 REV1Q9UBZ9 1251 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 CCL27Q9Y4X3 112 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 V9GYH0 126 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 OR14I1A6ND48 311 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 SOCS5O75159 536 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 SLC43A1O75387 559 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 CXCL14O95715 111 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ACP2P11117 423 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 AHCYP23526 432 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ITPKBP27987 946 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 TLX1P31314 330 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 TRIM23P36406 574 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ETV6P41212 452 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 MC3RP41968 323 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 CSRP3P50461 194 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 SIM1P81133 766 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 SQSTM1Q13501 440 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PRICKLE2Q7Z3G6 844 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 RANBP3LQ86VV4 465 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 BPHLQ86WA6 291 aaPredicted RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ARMC10Q8N2F6 343 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PGBD3Q8N328 593 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 OR52E2Q8NGJ4 325 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ST8SIA4Q92187 359 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 S100A16Q96FQ6 103 aaKnown RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 CAMK1GQ96NX5 476 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PLA2G12AQ9BZM1 189 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 GABARAPL1Q9H0R8 117 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 PPA2Q9H2U2 334 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 ISG20L2Q9H9L3 353 aaKnown RBP11.66□□□□□ -0.54
UBE3B-204ENST00000449510 SLC7A7Q9UM01 511 aa11.66□□□□□ -0.54
UBE3B-204ENST00000449510 EDARQ9UNE0 448 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms