RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 COQ8BQ96D53 544 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 C14orf79Q96F83 325 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 MARK4Q96L34 752 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 ZBTB18Q99592 522 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 YIPF4Q9BSR8 244 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 SLC6A15Q9H2J7 730 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 CXorf36Q9H7Y0 433 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 C15orf41Q9Y2V0 281 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 MEMO1Q9Y316 297 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 WIF1Q9Y5W5 379 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 USH1CQ9Y6N9 552 aa13.31□□□□□ -0.28
USP39-206ENST00000448971 INTS1Q8N201 2190 aaKnown RBP13.31□□□□□ -0.28
USP39-206ENST00000448971 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 TRGV5A0A0B4J1U4 118 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 NPIPA2E9PIF3 369 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 NPIPA3F8WFD2 350 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 TRAPPC6AO75865 159 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 CLDN14O95500 239 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 IGHG3P01860 377 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 HMGN2P05204 90 aaKnown RBP13.3□□□□□ -0.28
USP39-206ENST00000448971 ALOX5P09917 674 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 ACP2P11117 423 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 CYP4B1P13584 511 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 EVI2BP34910 448 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 CCT3P49368 545 aaKnown RBP13.3□□□□□ -0.28
USP39-206ENST00000448971 SNTA1Q13424 505 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 GAB1Q13480 694 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 SPANXN4Q5MJ08 99 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 ACAD11Q709F0 780 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 MAVSQ7Z434 540 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 FGD2Q7Z6J4 655 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 ANKRD46Q86W74 232 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 CHERPQ8IWX8 916 aaKnown RBP13.3□□□□□ -0.28
USP39-206ENST00000448971 CLECL1Q8IZS7 167 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 COX18Q8N8Q8 333 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 FAM57AQ8TBR7 257 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 SFXN5Q8TD22 340 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 TESCQ96BS2 214 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 MOAP1Q96BY2 351 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 GIMAP5Q96F15 307 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 MAELQ96JY0 434 aaKnown RBP13.3□□□□□ -0.28
USP39-206ENST00000448971 SPOCK3Q9BQ16 436 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 SLCO1B3Q9NPD5 702 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 QPCTLQ9NXS2 382 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 PCDHGB4Q9UN71 923 aa13.3□□□□□ -0.28
USP39-206ENST00000448971 FAF1Q9UNN5 650 aaPredicted RBP13.3□□□□□ -0.28
USP39-206ENST00000448971 C15orf38-AP3S2A0A0A6YYH1 394 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 RNF103-CHMP3A0A140T963 221 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 GXYLT2A0PJZ3 443 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 C9JVG2 144 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 RNASET2O00584 256 aaKnown RBP13.29□□□□□ -0.28
USP39-206ENST00000448971 ANKRD28O15084 1053 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 POLR3GO15318 223 aaPredicted RBP13.29□□□□□ -0.28
USP39-206ENST00000448971 NKX2-2O95096 273 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 IL33O95760 270 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 KRT16P08779 473 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 IDO1P14902 403 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 S100A3P33764 101 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 PTGDSP41222 190 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 TRPC1P48995 793 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 HBA1P69905 142 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 STX5Q13190 355 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 DUSP5Q16690 384 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 KRTAP21-3Q3LHN1 58 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 FAM174BQ3ZCQ3 159 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 ANXA8L1Q5VT79 327 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 FNDC7Q5VTL7 733 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 TIGD3Q6B0B8 471 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 BHLHB9Q6PI77 547 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 C3P1Q6ZMU1 363 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 NCCRP1Q6ZVX7 275 aaPredicted RBP13.29□□□□□ -0.28
USP39-206ENST00000448971 TRILQ7L0X0 811 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 GALNT10Q86SR1 603 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 SLC16A11Q8NCK7 471 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 VPS37AQ8NEZ2 397 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 OR8J2Q8NGG1 315 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 ACTRT2Q8TDY3 377 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 SARAFQ96BY9 339 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 DTNBP1Q96EV8 351 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 C16orf58Q96GQ5 468 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 GNRHR2Q96P88 292 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 OR52B2Q96RD2 323 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 TREX2Q9BQ50 279 aaPredicted RBP13.29□□□□□ -0.28
USP39-206ENST00000448971 ENKD1Q9H0I2 346 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 NTMQ9P121 344 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 PPP4R1LQ9P1A2 415 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 TNFRSF10DQ9UBN6 386 aa13.29□□□□□ -0.28
USP39-206ENST00000448971 OR14I1A6ND48 311 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 FIGNL2A6NMB9 653 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 AQP7O14520 342 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 BCKDKO14874 412 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 HCN1O60741 890 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 CPSF4O95639 269 aaKnown RBP13.28□□□□□ -0.28
USP39-206ENST00000448971 PTPN6P29350 595 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 GCKP35557 465 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 CLK3P49761 638 aaKnown RBP13.28□□□□□ -0.28
USP39-206ENST00000448971 UFM1P61960 85 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 POU6F2P78424 691 aaPredicted RBP13.28□□□□□ -0.28
USP39-206ENST00000448971 HSP90B2PQ58FF3 399 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 CDC73Q6P1J9 531 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms