RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 DUSP19Q8WTR2 217 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 EGLN2Q96KS0 407 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 PINK1Q9BXM7 581 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 OPN3Q9H1Y3 402 aaPredicted RBP25.51■■□□□ 1.67
CBX4-202ENST00000448310 SDHAF3Q9NRP4 125 aa25.51■■□□□ 1.67
CBX4-202ENST00000448310 FAM120CQ9NX05 1096 aaKnown RBP25.51■■□□□ 1.67
CBX4-202ENST00000448310 C6orf203Q9P0P8 240 aaPredicted RBP25.51■■□□□ 1.67
CBX4-202ENST00000448310 EIF3LQ9Y262 564 aaKnown RBP25.51■■□□□ 1.67
CBX4-202ENST00000448310 OR2M5A3KFT3 312 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 GMFGO60234 142 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 RSL1D1O76021 490 aaKnown RBP25.5■■□□□ 1.67
CBX4-202ENST00000448310 IL33O95760 270 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 CRHP06850 196 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 CLDN20P56880 219 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 ZNF474Q6S9Z5 364 aaPredicted RBP25.5■■□□□ 1.67
CBX4-202ENST00000448310 PGM2Q96G03 612 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 ZNF845Q96IR2 970 aaPredicted RBP25.5■■□□□ 1.67
CBX4-202ENST00000448310 WFIKKN1Q96NZ8 548 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 FAM111AQ96PZ2 611 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 LMF2Q9BU23 707 aaKnown RBP25.5■■□□□ 1.67
CBX4-202ENST00000448310 C12orf65Q9H3J6 166 aaKnown RBP25.5■■□□□ 1.67
CBX4-202ENST00000448310 NEUROD4Q9HD90 331 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 KLHL28Q9NXS3 571 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 PTGDR2Q9Y5Y4 395 aa25.5■■□□□ 1.67
CBX4-202ENST00000448310 GXYLT2A0PJZ3 443 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 FOSL1P15407 271 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 HOXC12P31275 282 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 KIR2DL2P43627 348 aaPredicted RBP25.49■■□□□ 1.67
CBX4-202ENST00000448310 GANABQ14697 944 aaKnown RBP25.49■■□□□ 1.67
CBX4-202ENST00000448310 ZNHIT3Q15649 155 aaPredicted RBP25.49■■□□□ 1.67
CBX4-202ENST00000448310 CFAP157Q5JU67 520 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 ANKRD26P1Q6NSI1 321 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 ZNF551Q7Z340 670 aaPredicted RBP25.49■■□□□ 1.67
CBX4-202ENST00000448310 KRTAP1-3Q8IUG1 177 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 FAM76AQ8TAV0 307 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 GFM2Q969S9 779 aaKnown RBP25.49■■□□□ 1.67
CBX4-202ENST00000448310 C1GALT1C1Q96EU7 318 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 PTGES2Q9H7Z7 377 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 EQTNQ9NQ60 294 aa25.49■■□□□ 1.67
CBX4-202ENST00000448310 RRAGDQ9NQL2 400 aaPredicted RBP25.49■■□□□ 1.67
CBX4-202ENST00000448310 SHISA8B8ZZ34 492 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 SIAH2O43255 324 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 UTS2O95399 124 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 GABRA3P34903 492 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 CD79BP40259 229 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 HSPB3Q12988 150 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 CLEC6AQ6EIG7 209 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 SH2D5Q6ZV89 423 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 IKBIPQ70UQ0 350 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 CEP112Q8N8E3 955 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 FNDC9Q8TBE3 224 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 PIK3R3Q92569 461 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 SMR3AQ99954 134 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 CCL27Q9Y4X3 112 aa25.48■■□□□ 1.67
CBX4-202ENST00000448310 PLIN3O60664 434 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 SEC22BO75396 215 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 TNFRSF21O75509 655 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 IGKV1D-16P01601 117 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 SHBGP04278 402 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 CLK3P49761 638 aaKnown RBP25.47■■□□□ 1.67
CBX4-202ENST00000448310 EEFSECP57772 596 aaKnown RBP25.47■■□□□ 1.67
CBX4-202ENST00000448310 PON3Q15166 354 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 APOOLQ6UXV4 268 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 CIDECQ96AQ7 238 aaPredicted RBP25.47■■□□□ 1.67
CBX4-202ENST00000448310 TBL1XR1Q9BZK7 514 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 BEX4Q9NWD9 120 aaPredicted RBP25.47■■□□□ 1.67
CBX4-202ENST00000448310 MRTO4Q9UKD2 239 aaKnown RBP25.47■■□□□ 1.67
CBX4-202ENST00000448310 WBP11Q9Y2W2 641 aaKnown RBP25.47■■□□□ 1.67
CBX4-202ENST00000448310 HEATR5AQ86XA9 2040 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 ARID1AO14497 2285 aa25.47■■□□□ 1.67
CBX4-202ENST00000448310 CTIFO43310 598 aaKnown RBP25.46■■□□□ 1.67
CBX4-202ENST00000448310 ANGPTL1O95841 491 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 CCKARP32238 428 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 DNAJB13P59910 316 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 KIAA0040Q15053 153 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 GRAMD1BQ3KR37 738 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 GALNT10Q86SR1 603 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 CXorf67Q86X51 503 aaPredicted RBP25.46■■□□□ 1.67
CBX4-202ENST00000448310 CCDC63Q8NA47 563 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 PIGQQ9BRB3 760 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 RNF122Q9H9V4 155 aa25.46■■□□□ 1.67
CBX4-202ENST00000448310 DEFB108AA8MXU0 73 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 H3BQF6 201 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 UROSP10746 265 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 POU2F1P14859 743 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 PSMD4P55036 377 aaKnown RBP25.45■■□□□ 1.66
CBX4-202ENST00000448310 NKX6-1P78426 367 aaPredicted RBP25.45■■□□□ 1.66
CBX4-202ENST00000448310 CCDC153Q494R4 210 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 Q71RC1 249 aaPredicted RBP25.45■■□□□ 1.66
CBX4-202ENST00000448310 ZNF550Q7Z398 422 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 EXOC3L1Q86VI1 746 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 KIF18AQ8NI77 898 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 MED18Q9BUE0 208 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 OXSMQ9NWU1 459 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 FIS1Q9Y3D6 152 aa25.45■■□□□ 1.66
CBX4-202ENST00000448310 SMIM23A6NLE4 172 aa25.44■■□□□ 1.66
CBX4-202ENST00000448310 LINC01387J3KSC0 135 aa25.44■■□□□ 1.66
CBX4-202ENST00000448310 PDPK1O15530 556 aa25.44■■□□□ 1.66
CBX4-202ENST00000448310 EMC8O43402 210 aa25.44■■□□□ 1.66
CBX4-202ENST00000448310 CGAP01215 116 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms