RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 HOXB9P17482 250 aaPredicted RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 TNFSF10P50591 281 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 CRISP3P54108 245 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 NTRK2Q16620 822 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 ZNF630Q2M218 657 aaPredicted RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 ARHGAP11BQ3KRB8 267 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 FLYWCH1Q4VC44 716 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 RABL3Q5HYI8 236 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 TBCELQ5QJ74 424 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 EXOSC6Q5RKV6 272 aaKnown RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 ZNF468Q5VIY5 522 aaPredicted RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 SLC25A25Q6KCM7 469 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 LYPD8Q6UX82 237 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 SERPINA11Q86U17 422 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 METTL25Q8N6Q8 603 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 ZNF527Q8NB42 609 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 TMEM178AQ8NBL3 297 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 GALNT11Q8NCW6 608 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 CHDHQ8NE62 594 aaPredicted RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 CATSPER1Q8NEC5 780 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 OR10G3Q8NGC4 313 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 TRNT1Q96Q11 434 aaKnown RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 SECISBP2Q96T21 854 aaKnown RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 SPATA9Q9BWV2 254 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 TRIM45Q9H8W5 580 aaPredicted RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 A4GALTQ9NPC4 353 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 SPAG4Q9NPE6 437 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 KLHL1Q9NR64 748 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 POLE3Q9NRF9 147 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 SACM1LQ9NTJ5 587 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 KLRF1Q9NZS2 232 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 KLF13Q9Y2Y9 288 aaPredicted RBP10.65□□□□□ -0.7
LINC00408-201ENST00000447784 KCNE3Q9Y6H6 103 aa10.65□□□□□ -0.7
LINC00408-201ENST00000447784 H3BNH8 94 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 KLRC4-KLRK1H3BQV0 150 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 FXYD1O00168 92 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 SCDO00767 359 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 TSPAN2O60636 221 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 ZNF354AO60765 605 aaPredicted RBP10.64□□□□□ -0.71
LINC00408-201ENST00000447784 HNRNPCL1O60812 293 aaKnown RBP10.64□□□□□ -0.71
LINC00408-201ENST00000447784 UGT2B11O75310 529 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 ATP5HO75947 161 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 NEURL1O76050 574 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 UTS2O95399 124 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 C1QCP02747 245 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 BCHEP06276 602 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 SP1P08047 785 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 TFPTP0C1Z6 253 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 CYP4B1P13584 511 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 SLC6A2P23975 617 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 RASSF2P50749 326 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 SLC7A2P52569 658 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 MVDP53602 400 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 KCNJ2P63252 427 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 CDK6Q00534 326 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 RBBP4Q09028 425 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 GPR68Q15743 365 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 ZNF766Q5HY98 468 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 HEPHL1Q6MZM0 1159 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 ERICH5Q6P6B1 374 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 GALNT10Q86SR1 603 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 SLC30A8Q8IWU4 369 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 PGAM4Q8N0Y7 254 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 ANKFN1Q8N957 763 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 FAM98AQ8NCA5 519 aaKnown RBP10.64□□□□□ -0.71
LINC00408-201ENST00000447784 C11orf65Q8NCR3 313 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 PSD4Q8NDX1 1056 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 OR10A6Q8NH74 314 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 FAM110BQ8TC76 370 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 SPPL2AQ8TCT8 520 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 SDF2Q99470 211 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 GPATCH1Q9BRR8 931 aaKnown RBP10.64□□□□□ -0.71
LINC00408-201ENST00000447784 TBL1XR1Q9BZK7 514 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 TRIM8Q9BZR9 551 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 IKZF5Q9H5V7 419 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 PIF1Q9H611 641 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 KAT8Q9H7Z6 458 aaKnown RBP10.64□□□□□ -0.71
LINC00408-201ENST00000447784 HHATLQ9HCP6 504 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 SDHAF3Q9NRP4 125 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 UBQLN4Q9NRR5 601 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 ANGPT4Q9Y264 503 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 WDR45Q9Y484 360 aa10.64□□□□□ -0.71
LINC00408-201ENST00000447784 PRAMEF25A6NGN4 478 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 GSTA4O15217 222 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 GYG2O15488 501 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 DNAJA2O60884 412 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 ICOSLGO75144 302 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 GMNNO75496 209 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 TNFRSF21O75509 655 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 SNX4O95219 450 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 H6PDO95479 791 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 IGKV1D-16P01601 117 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 GUSBP08236 651 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 NUDT7P0C024 238 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 BMP2P12643 396 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 CNR1P21554 472 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 MASP1P48740 699 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 SLC25A3Q00325 362 aa10.63□□□□□ -0.71
LINC00408-201ENST00000447784 LIPEQ05469 1076 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms