RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CYS1Q717R9 158 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 TUBA1AQ71U36 451 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 TRIM69Q86WT6 500 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 OR4D10Q8NGI6 311 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 OR9A1PQ8NGU1 263 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 OR2T11Q8NH01 316 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 FBXO25Q8TCJ0 367 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 GLYATL2Q8WU03 294 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 AGAP4Q96P64 663 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 COPS8Q99627 209 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 TUBA1CQ9BQE3 449 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 TSSK1BQ9BXA7 367 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 HAUS4Q9H6D7 363 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 DCAF13Q9NV06 445 aaKnown RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 DUS2Q9NX74 493 aaKnown RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 PDP1Q9P0J1 537 aaPredicted RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 GCNT4Q9P109 453 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 PACSIN2Q9UNF0 486 aaPredicted RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 EXOSC1Q9Y3B2 195 aaKnown RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 KIF27Q86VH2 1401 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 FRG2CA6NGY1 282 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 ZNF724A8MTY0 619 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 C9JVG2 144 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 GOLGA8SH3BPF8 625 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 SOCS2O14508 198 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 POLR3GO15318 223 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 TRIM3O75382 744 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 STX11O75558 287 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 FLOT1O75955 427 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 NADKO95544 446 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 NPPAP01160 153 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 UBTFL6P0CB48 400 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 TUBG1P23258 451 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 OTX1P32242 354 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 CRYBB2P43320 205 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 DUSP3P51452 185 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 CDH6P55285 790 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 C21orf59P57076 290 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 KRTAP10-2P60368 255 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 CDR2Q01850 454 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 OC90Q02509 493 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 MERTKQ12866 999 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 CCDC6Q16204 474 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC15A2Q16348 729 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 CYBRD1Q53TN4 286 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 OTUD3Q5T2D3 398 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 PAQR6Q6TCH4 344 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 UQCC3Q6UW78 93 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 Q71RC1 249 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 LUZP2Q86TE4 346 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 ZNF575Q86XF7 245 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 TBC1D10CQ8IV04 446 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 FGFRL1Q8N441 504 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 TMIGD2Q96BF3 282 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 IFT74Q96LB3 600 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 C12orf42Q96LP6 360 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 NSMCE3Q96MG7 304 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC6A7Q99884 636 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 SIKE1Q9BRV8 207 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 TUBGCP2Q9BSJ2 902 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 GPR174Q9BXC1 333 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 IKZF5Q9H5V7 419 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 POLE4Q9NR33 117 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 TUBG2Q9NRH3 451 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 KLHL28Q9NXS3 571 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 IL36GQ9NZH8 169 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 GALPQ9UBC7 116 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 ZNF221Q9UK13 617 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 ING1Q9UK53 422 aaPredicted RBP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 TBC1D24Q9ULP9 559 aa4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.51□□□□□ -1.69
TM9SF3-202ENST00000443638 NPIPA5A0A0B4J1W7 369 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 A0A0J9YVX5 310 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 ACOD1A6NK06 481 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 NPIPA5E9PKD4 350 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 GOLGA8TH3BQL2 631 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 EI24O14681 340 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 SURF4O15260 269 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 MSH4O15457 936 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 RANBP6O60518 1105 aaKnown RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 OR2F2O95006 317 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 CLDN9O95484 217 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 F10P00742 488 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 GAPDHP04406 335 aaKnown RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 ATP1B2P14415 290 aaPredicted RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 H2AFXP16104 143 aaPredicted RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 SRMP19623 302 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 CD1BP29016 333 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 HNRNPH3P31942 346 aaKnown RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 CASP14P31944 242 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 SLC1A4P43007 532 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 KCNJ4P48050 445 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 PLP1P60201 277 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 IL9RQ01113 521 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 ZNF85Q03923 595 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 KLF9Q13886 244 aaPredicted RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 UBE2V2Q15819 145 aa4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 EZH2Q15910 746 aaKnown RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 MTHFSDQ2M296 383 aaKnown RBP4.5□□□□□ -1.69
TM9SF3-202ENST00000443638 HSP90B2PQ58FF3 399 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms