RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 POU4F3Q15319 338 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 DEFB113Q30KQ7 82 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 LIPMQ5VYY2 423 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 PPP4R4Q6NUP7 873 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 PLXDC2Q6UX71 529 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 TRIM46Q7Z4K8 759 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 OR2L13Q8N349 312 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 FADS6Q8N9I5 356 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 OR2M3Q8NG83 312 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 MZB1Q8WU39 189 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 RNF138Q8WVD3 245 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 SMPDL3BQ92485 455 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 ELP4Q96EB1 424 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 AMDHD1Q96NU7 426 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 LMF2Q9BU23 707 aaKnown RBP10.65□□□□□ -0.7
TTC28-203ENST00000442232 G6PC3Q9BUM1 346 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 LRTM1Q9HBL6 345 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 NEUROD4Q9HD90 331 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 ZNF226Q9NYT6 803 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 TAS2R7Q9NYW3 318 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 MED11Q9P086 117 aa10.65□□□□□ -0.7
TTC28-203ENST00000442232 A0A1W2PPM1 405 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 A8MXE2 369 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 UPK1AO00322 258 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 FADS1O60427 444 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 ATE1O95260 518 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 UTS2O95399 124 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 TGM6O95932 706 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 HRGP04196 525 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 PRPS2P11908 318 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 GABRA3P34903 492 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 CRHR1P34998 444 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 KCNJ5P48544 419 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 C17orf67Q0P5P2 114 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 SGCBQ16585 318 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 MARCH3Q86UD3 253 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 GSPT2Q8IYD1 628 aaKnown RBP10.64□□□□□ -0.71
TTC28-203ENST00000442232 CEP70Q8NHQ1 597 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 GPR151Q8TDV0 419 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 PPCDCQ96CD2 204 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 TRIM44Q96DX7 344 aaPredicted RBP10.64□□□□□ -0.71
TTC28-203ENST00000442232 C1GALT1C1Q96EU7 318 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 ZBED6CLQ96FA7 236 aaPredicted RBP10.64□□□□□ -0.71
TTC28-203ENST00000442232 PGM2Q96G03 612 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 ZNF845Q96IR2 970 aaPredicted RBP10.64□□□□□ -0.71
TTC28-203ENST00000442232 CCT7Q99832 543 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 SLC39A3Q9BRY0 314 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 PINK1Q9BXM7 581 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 TXLNGYQ9BZA5 131 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 PRRG4Q9BZD6 226 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 OXSMQ9NWU1 459 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 C1orf109Q9NX04 203 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 FIS1Q9Y3D6 152 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 ZNF175Q9Y473 711 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 ZFHX3Q15911 3703 aa10.64□□□□□ -0.71
TTC28-203ENST00000442232 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 OR2M5A3KFT3 312 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 AZIN1O14977 448 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 GMFGO60234 142 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 TNFSF13O75888 250 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 PSMG1O95456 288 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 ANGPTL1O95841 491 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 PLGP00747 810 aaPredicted RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 POU2F1P14859 743 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 HPGDP15428 266 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 KRT4P19013 534 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 PRPH2P23942 346 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 HPCAL1P37235 193 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 CD79BP40259 229 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 ASMTP46597 345 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 ZNF41P51814 821 aaPredicted RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 PRKAG1P54619 331 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 MANFP55145 182 aaKnown RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 B3GALT5-AS1P59052 145 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 FOXD4Q12950 439 aaPredicted RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 GLYR1Q49A26 553 aaPredicted RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 CLEC6AQ6EIG7 209 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 ZNF551Q7Z340 670 aaPredicted RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 TDRPQ86YL5 185 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 EIF1ADQ8N9N8 165 aaKnown RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 CDRT4Q8N9R6 151 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 NUP43Q8NFH3 380 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.63□□□□□ -0.71
TTC28-203ENST00000442232 DUSP19Q8WTR2 217 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 SLC9A6Q92581 669 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 ZNF764Q96H86 408 aaPredicted RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 MS4A4EQ96PG1 132 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 TRMOQ9BU70 441 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 MED18Q9BUE0 208 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 REEP4Q9H6H4 257 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 FANCFQ9NPI8 374 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 BEX4Q9NWD9 120 aaPredicted RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 SH3BP4Q9P0V3 963 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 PROCRQ9UNN8 238 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 TMED5Q9Y3A6 229 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 TESMINQ9Y4I5 508 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 AP4B1Q9Y6B7 739 aa10.63□□□□□ -0.71
TTC28-203ENST00000442232 FLNAP21333 2647 aaKnown RBP10.63□□□□□ -0.71
TTC28-203ENST00000442232 A0A087WZY1 265 aa10.62□□□□□ -0.71
TTC28-203ENST00000442232 C17orf51A8MQB3 221 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms