RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PABPC4LP0CB38 370 aaKnown RBP7.05□□□□□ -1.28
CD44-211ENST00000442151 HPGDP15428 266 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 FPR1P21462 350 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 PRPH2P23942 346 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 ECHS1P30084 290 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 PTGDSP41222 190 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 SERPINB4P48594 390 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 PRIM2P49643 509 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 MANFP55145 182 aaKnown RBP7.05□□□□□ -1.28
CD44-211ENST00000442151 GFRA1P56159 465 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 RAE1P78406 368 aaKnown RBP7.05□□□□□ -1.28
CD44-211ENST00000442151 MRPS35P82673 323 aaKnown RBP7.05□□□□□ -1.28
CD44-211ENST00000442151 LTB4RQ15722 352 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 SGCBQ16585 318 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 LIPMQ5VYY2 423 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 FRMD7Q6ZUT3 714 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 CDRT4Q8N9R6 151 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 OR6Y1Q8NGX8 325 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 ELP4Q96EB1 424 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 LMF2Q9BU23 707 aaKnown RBP7.05□□□□□ -1.28
CD44-211ENST00000442151 G6PC3Q9BUM1 346 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 HOXD1Q9GZZ0 328 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 GSTO2Q9H4Y5 243 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 LRTM1Q9HBL6 345 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 TIGARQ9NQ88 270 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 GLRX2Q9NS18 164 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 BEX4Q9NWD9 120 aaPredicted RBP7.05□□□□□ -1.28
CD44-211ENST00000442151 TBK1Q9UHD2 729 aa7.05□□□□□ -1.28
CD44-211ENST00000442151 INTS1Q8N201 2190 aaKnown RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 CELSR2Q9HCU4 2923 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 A0A1W2PS29 197 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 SH3D21A4FU49 640 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 SLC22A20A6NK97 555 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 A8MXE2 369 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 H3BNH8 94 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 GOLGA8RI6L899 631 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 PDPK1O15530 556 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 HCRTR2O43614 444 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 TRIM13O60858 407 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 JUNP05412 331 aaKnown RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 PPP3CBP16298 524 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 ZNF708P17019 499 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 GABRA3P34903 492 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 SERPINB5P36952 375 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 LHX2P50458 406 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 PRR5P85299 388 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 SH2D4BQ5SQS7 431 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 RAET1LQ5VY80 246 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 SHEQ5VZ18 495 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 RPS27LQ71UM5 84 aaKnown RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 ADGRE4PQ86SQ3 457 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 EXOC3L1Q86VI1 746 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 WDR75Q8IWA0 830 aaKnown RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 KIRREL3Q8IZU9 778 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 OR2L13Q8N349 312 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 C9orf106Q8NAJ2 232 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 ZNF511Q8NB15 262 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 OR7G2Q8NG99 324 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 RNF138Q8WVD3 245 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 PIGTQ969N2 578 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 INTS12Q96CB8 462 aaKnown RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 PPCDCQ96CD2 204 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 AMDHD1Q96NU7 426 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 HBEGFQ99075 208 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 RHOXF2Q9BQY4 288 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 EBPLQ9BY08 206 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 DSN1Q9H410 356 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 REEP4Q9H6H4 257 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 GALNT9Q9HCQ5 603 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 ACSS1Q9NUB1 689 aaPredicted RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 CCM2LQ9NUG4 571 aaPredicted RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 ATAD3AQ9NVI7 634 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 OXSMQ9NWU1 459 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 DTX4Q9Y2E6 619 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 GJE1A6NN92 205 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 AZIN1O14977 448 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 EMC8O43402 210 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 ZIC3O60481 467 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 PLIN3O60664 434 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 TMCC2O75069 709 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 LYPLA1O75608 230 aaPredicted RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 SYNGR4O95473 234 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 NGFRP08138 427 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 ALOX5P09917 674 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 CHN1P15882 459 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 GCAP28676 217 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 HPCAL1P37235 193 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 TP53BP2Q13625 1128 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 KRTAP21-3Q3LHN1 58 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 LSM12Q3MHD2 195 aaKnown RBP7.04□□□□□ -1.28
CD44-211ENST00000442151 LINC01559Q495D7 138 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 BHLHB9Q6PI77 547 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 TMEM107Q6UX40 140 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 PAMR1Q6UXH9 720 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 STK32CQ86UX6 486 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 FADS6Q8N9I5 356 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 ZNF527Q8NB42 609 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 NAXEQ8NCW5 288 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 OR2M3Q8NG83 312 aa7.04□□□□□ -1.28
CD44-211ENST00000442151 GPR151Q8TDV0 419 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms