RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 CDCA3Q99618 268 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FICDQ9BVA6 458 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FAM107BQ9H098 131 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 OPN3Q9H1Y3 402 aaPredicted RBP3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 GANQ9H2C0 597 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 MARCH7Q9H992 704 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 NT5MQ9NPB1 228 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ELOVL2Q9NXB9 296 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 AHSPQ9NZD4 102 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 IFT52Q9Y366 437 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 RHBDD3Q9Y3P4 386 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 ABCC2Q92887 1545 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 FHOD3Q2V2M9 1422 aa3.66□□□□□ -1.82
CDC42BPA-207ENST00000441725 CEP350Q5VT06 3117 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 CUL7Q14999 1698 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 ATP6AP2A0A1C7CYW4 349 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 A0A1W2PPI3 338 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 PCP4L1A6NKN8 68 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 ANKRD30BLA7E2S9 258 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF701M0R085 212 aaPredicted RBP3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 ABCD4O14678 606 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 COCHO43405 550 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 SNAPINO95295 136 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 RAB3DO95716 219 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 ATP1B1P05026 303 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 RRASP10301 218 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 M6PRP20645 277 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 ZNF10P21506 573 aaPredicted RBP3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 CCNE1P24864 410 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 CD40LGP29965 261 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 ERFP50548 548 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 SRSF4Q08170 494 aaKnown RBP3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 SIGLEC14Q08ET2 396 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 GCKRQ14397 625 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 KIR2DS3Q14952 304 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 HEPACAMQ14CZ8 416 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 EXT1Q16394 746 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 SGSM1Q2NKQ1 1148 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 PDLIM3Q53GG5 364 aaPredicted RBP3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 TEX44Q53QW1 395 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 WSCD1Q658N2 575 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 DUPD1Q68J44 220 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 ANO5Q75V66 913 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 SFR1Q86XK3 245 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 COMMD1Q8N668 190 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 TTC29Q8NA56 475 aaPredicted RBP3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 STKLD1Q8NE28 680 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 DTD1Q8TEA8 209 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 CHPT1Q8WUD6 406 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 TMEM45BQ96B21 275 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 GPA33Q99795 319 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 CHID1Q9BWS9 393 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 TMPRSS5Q9H3S3 457 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 GAREM1Q9H706 876 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 RDH8Q9NYR8 311 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 PISDQ9UG56 409 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 PILRBQ9UKJ0 227 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 FOXJ3Q9UPW0 622 aa3.65□□□□□ -1.82
CDC42BPA-207ENST00000441725 RPAP1Q9BWH6 1393 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 BIRC5O15392 142 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SYNGR3O43761 229 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 OR4F21O95013 312 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 CA3P07451 260 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 STSP08842 583 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 FCGR2BP31994 310 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 OTX2P32243 289 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SPAM1P38567 509 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SLC6A8P48029 635 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 CCT3P49368 545 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 DNA2P51530 1060 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 UBE2G2P60604 165 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 LRRC63Q05C16 580 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 GABPAQ06546 454 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 GPR50Q13585 617 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 KLF9Q13886 244 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 EXOSC7Q15024 291 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 FAM189A2Q15884 450 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SRSF7Q16629 238 aaKnown RBP eCLIP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SIRPB2Q5JXA9 342 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 RABGAP1LQ5R372 815 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 IRAK1BP1Q5VVH5 260 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 MLIPQ5VWP3 458 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 LYPLAL1Q5VWZ2 237 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 RNLSQ5VYX0 342 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 LIPJQ5W064 366 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 ZNF776Q68DI1 518 aaPredicted RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 NADSYN1Q6IA69 706 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 SLC27A4Q6P1M0 643 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 TMIGD1Q6UXZ0 262 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 TMEM64Q6YI46 380 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 CDHR3Q6ZTQ4 885 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 BZW1Q7L1Q6 419 aaKnown RBP3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 PIM3Q86V86 326 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 CYP4Z1Q86W10 505 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 UBQLNLQ8IYU4 475 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 OR7G1Q8NGA0 311 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 OR7A2PQ8NGA2 310 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 CD99L2Q8TCZ2 262 aa3.65□□□□□ -1.83
CDC42BPA-207ENST00000441725 U2AF1L4Q8WU68 220 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms