RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 CDKN3Q16667 212 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 ZNF57Q68EA5 555 aaPredicted RBP3.56□□□□□ -1.84
PFDN4-202ENST00000441080 ZCCHC12Q6PEW1 402 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 ISLR2Q6UXK2 745 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 SYVN1Q86TM6 617 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 APOBEC3FQ8IUX4 373 aaKnown RBP3.56□□□□□ -1.84
PFDN4-202ENST00000441080 EFCAB13Q8IY85 973 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 CADM2Q8N3J6 435 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 OR52B4Q8NGK2 314 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 OR13F1Q8NGS4 319 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 UPRTQ96BW1 309 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 MAPKAP1Q9BPZ7 522 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 DPH7Q9BTV6 452 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 TSSK1BQ9BXA7 367 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 NFKBIZQ9BYH8 718 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 YTHDF1Q9BYJ9 559 aaKnown RBP3.56□□□□□ -1.84
PFDN4-202ENST00000441080 GLT8D2Q9H1C3 349 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 LPAR2Q9HBW0 351 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 VAT1LQ9HCJ6 419 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 EHFQ9NZC4 300 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 GALPQ9UBC7 116 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 ATP6V1HQ9UI12 483 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 FOXJ3Q9UPW0 622 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 MOKQ9UQ07 419 aa3.56□□□□□ -1.84
PFDN4-202ENST00000441080 EIF3LQ9Y262 564 aaKnown RBP3.56□□□□□ -1.84
PFDN4-202ENST00000441080 IGKV6D-41A0A0C4DH26 115 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 WASHC1A8K0Z3 465 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 WASH3PC4AMC7 463 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 APBB3O95704 486 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 DNAH10OSP0CZ25 163 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 UQCRBP14927 111 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 ZBTB25P24278 435 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 CCND2P30279 289 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 NF2P35240 595 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 MTTPP55157 894 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 OSTNP61366 133 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 RFTN1Q14699 578 aaPredicted RBP3.55□□□□□ -1.84
PFDN4-202ENST00000441080 ADPRMQ3LIE5 342 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 DCAF4L1Q3SXM0 396 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 PAGE2BQ5JRK9 111 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 ZNF658Q5TYW1 1059 aaPredicted RBP3.55□□□□□ -1.84
PFDN4-202ENST00000441080 WASH2PQ6VEQ5 465 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 MISPQ8IVT2 679 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 FBXO16Q8IX29 292 aaPredicted RBP3.55□□□□□ -1.84
PFDN4-202ENST00000441080 C9orf40Q8IXQ3 194 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 UBQLNLQ8IYU4 475 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 CSNK1A1LQ8N752 337 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 ADAMTS16Q8TE57 1224 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 KIR2DL4Q99706 377 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 GPN2Q9H9Y4 310 aaPredicted RBP3.55□□□□□ -1.84
PFDN4-202ENST00000441080 POLD4Q9HCU8 107 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 RBM28Q9NW13 759 aaKnown RBP3.55□□□□□ -1.84
PFDN4-202ENST00000441080 KLHL21Q9UJP4 597 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 MGAT4BQ9UQ53 548 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 FLVCR1Q9Y5Y0 555 aa3.55□□□□□ -1.84
PFDN4-202ENST00000441080 ADAMTS9Q9P2N4 1935 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 METP08581 1390 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 IGLV8-61A0A075B6I0 122 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 E7ENQ6 273 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 PGK1P00558 417 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 H2AFXP16104 143 aaPredicted RBP3.54□□□□□ -1.84
PFDN4-202ENST00000441080 P2RY4P51582 365 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 LYZP61626 148 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 HSF2Q03933 536 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 DPYSQ14117 519 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 TEX44Q53QW1 395 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 UFSP1Q6NVU6 142 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 SCYL2Q6P3W7 929 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 TMEM184AQ6ZMB5 413 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 HSD11B1LQ7Z5J1 315 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 IFNEQ86WN2 208 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 ZNF677Q86XU0 584 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 BPIFB2Q8N4F0 458 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 STKLD1Q8NE28 680 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 VSTM2LQ96N03 204 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 TBCDQ9BTW9 1192 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 COMMD4Q9H0A8 199 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 PNO1Q9NRX1 252 aaKnown RBP3.54□□□□□ -1.84
PFDN4-202ENST00000441080 ATXN10Q9UBB4 475 aa3.54□□□□□ -1.84
PFDN4-202ENST00000441080 APOBEC3BQ9UH17 382 aaKnown RBP3.54□□□□□ -1.84
PFDN4-202ENST00000441080 CCDC7Q96M83 1385 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 A0A0U1RQV5 110 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 ZSCAN5BA6NJL1 495 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 VPS26AO75436 327 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 P0C879 139 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 ANXA3P12429 323 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 PAICSP22234 425 aaKnown RBP3.53□□□□□ -1.84
PFDN4-202ENST00000441080 CDH5P33151 784 aaPredicted RBP3.53□□□□□ -1.84
PFDN4-202ENST00000441080 RPL4P36578 427 aaKnown RBP3.53□□□□□ -1.84
PFDN4-202ENST00000441080 NDPQ00604 133 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 UNC5DQ6UXZ4 953 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 STAC2Q6ZMT1 411 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 LRRC70Q7Z2Q7 622 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 ERASQ7Z444 233 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 VASH2Q86V25 355 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 SELENOMQ8WWX9 145 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 TMEM80Q96HE8 168 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 HPDLQ96IR7 371 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 C19orf24Q9BVV8 132 aa3.53□□□□□ -1.84
PFDN4-202ENST00000441080 SLC25A51Q9H1U9 297 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms