RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 ADRB3P13945 408 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 RPS5P46782 204 aaKnown RBP17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 TAS2R38P59533 333 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 BTN3A2P78410 334 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 QSOX2Q6ZRP7 698 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 SLC16A11Q8NCK7 471 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 NUP43Q8NFH3 380 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 CNRIP1Q96F85 164 aaPredicted RBP17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 LMLNQ96KR4 655 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 LRRC3BQ96PB8 259 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 SPRTNQ9H040 489 aaPredicted RBP17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 SLA2Q9H6Q3 261 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 SLC28A3Q9HAS3 691 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 SPATA2Q9UM82 520 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 SIRT4Q9Y6E7 314 aaPredicted RBP17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 VPS13AQ96RL7 3174 aa17.11■□□□□ 0.33
PTPRJ-202ENST00000440289 CIB4A0PJX0 185 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 I3L521 148 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 SSNA1O43805 119 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 ITGB7P26010 798 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 ERP29P30040 261 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 GABRA5P31644 462 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 KHKP50053 298 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 AGFG1P52594 562 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 PCDH1Q08174 1060 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 DSG2Q14126 1118 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 AGERQ15109 404 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 OCLNQ16625 522 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 KLHDC8AQ8IYD2 350 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 LRRC17Q8N6Y2 441 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 TMEM99Q8N816 258 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 ZNF431Q8TF32 576 aaPredicted RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 PRRC1Q96M27 445 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 DPCDQ9BVM2 203 aaPredicted RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 ENKD1Q9H0I2 346 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 CACYBPQ9HB71 228 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 ZSCAN32Q9NX65 697 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 USP36Q9P275 1121 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 NCKAP1Q9Y2A7 1128 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 MRPS23Q9Y3D9 190 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 CENPVL1A0A0U1RR11 272 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 A8MUA0 341 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 E9PI62 339 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 CDC42EP2O14613 210 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 EPCAMP16422 314 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 GZMKP49863 264 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 PDX1P52945 283 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 SIM1P81133 766 aaPredicted RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 RAB40BQ12829 278 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 SERPINA12Q8IW75 414 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 LINC01555Q8NAE3 123 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 RASSF5Q8WWW0 418 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 METTL2AQ96IZ6 378 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 MAP6Q96JE9 813 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 HCAR1Q9BXC0 346 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 TEX12Q9BXU0 123 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 KLHL28Q9NXS3 571 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 STMN3Q9NZ72 180 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 TESQ9UGI8 421 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 DOCK9Q9BZ29 2069 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 A0A1W2PR48 441 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 A0A1W2PRQ8 180 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 EIF4EP06730 217 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 GRPRP30550 384 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 ADAM15Q13444 863 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 GPR176Q14439 515 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 ZNF628Q5EBL2 1059 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 TOR1AIP1Q5JTV8 583 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 MZT2AQ6P582 158 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 CEACAM19Q7Z692 300 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 GPR135Q8IZ08 494 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 AKAP1Q92667 903 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 THAP7Q9BT49 309 aaPredicted RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 IFT27Q9BW83 186 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 MKRN2Q9H000 416 aaKnown RBP17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 RNF32Q9H0A6 362 aa17.1■□□□□ 0.33
PTPRJ-202ENST00000440289 C4orf51C9J302 202 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 PRG2P13727 222 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 LAG3P18627 525 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 PYCR1P32322 319 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 OR3A3P47888 321 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 RRAS2P62070 204 aaPredicted RBP17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 FUT5Q11128 374 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 SFRP4Q6FHJ7 346 aaPredicted RBP17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 FIGNL1Q6PIW4 674 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 CXXC5Q7LFL8 322 aaKnown RBP17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 UBE3DQ7Z6J8 389 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 MORN4Q8NDC4 146 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 OR7D2Q96RA2 312 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 ACOXLQ9NUZ1 547 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 SAGE1Q9NXZ1 904 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 TRAV27A0A087WT01 109 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 GIFP27352 417 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 MLLT3P42568 568 aaPredicted RBP17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 RPA4Q13156 261 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 NTRK2Q16620 822 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 IKBIPQ70UQ0 350 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 NR2C2APQ86WQ0 139 aa17.09■□□□□ 0.33
PTPRJ-202ENST00000440289 LRRC56Q8IYG6 542 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms