RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MMP11P24347 488 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SPIBQ01892 262 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 KCNC4Q03721 635 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SYPL1Q16563 259 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SLC36A3Q495N2 470 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PRAMEF8Q5VWM4 474 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PRAMEF7Q5VXH5 474 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 BORAQ6PGQ7 559 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 KIRREL2Q6UWL6 708 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CYP4Z1Q86W10 505 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SMYD1Q8NB12 490 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR7G2Q8NG99 324 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ADAMTS15Q8TE58 950 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 NRBF2Q96F24 287 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OTUB1Q96FW1 271 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 COL21A1Q96P44 957 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SMURF2Q9HAU4 748 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 P4HTMQ9NXG6 502 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 VNN3Q9NY84 501 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 LIPT1Q9Y234 373 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 KCNMB2Q9Y691 235 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ATMQ13315 3056 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SPTA1P02549 2419 aa13.51□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IGHV3-20A0A0C4DH32 117 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DUXAA6NLW8 204 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SNAP29O95721 258 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ATP1B1P05026 303 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ITGB2P05107 769 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IFI6P09912 130 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TNFRSF1BP20333 461 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MYF6P23409 242 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IGFBP5P24593 272 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RRM2P31350 389 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 BTG2P78543 158 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 RHAGQ02094 409 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PPP1R8Q12972 351 aaKnown RBP13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF628Q5EBL2 1059 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TTC23Q5W5X9 447 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MFSD12Q6NUT3 480 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CDC73Q6P1J9 531 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 HS3ST5Q8IZT8 346 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR11G2Q8NGC1 345 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 THAP4Q8WY91 577 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 C16orf58Q96GQ5 468 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 C7orf34Q96L11 122 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR1F2PQ96R84 312 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF300Q96RE9 604 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TREX2Q9BQ50 279 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 BTBD2Q9BX70 525 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 UBAP1Q9NZ09 502 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PDP1Q9P0J1 537 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SH3GLB1Q9Y371 365 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TESMINQ9Y4I5 508 aa13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MAGED1Q9Y5V3 778 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GPC6Q9Y625 555 aaPredicted RBP13.5□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CFAP46Q8IYW2 2715 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 A0A087WV62 115 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 A0A0G2JPF8 293 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MYOCOSA0A1B0GUC4 107 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 HNRNPCL2B2RXH8 293 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 HNRNPCL3B7ZW38 293 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TGFBR3LH3BV60 316 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TNFRSF11BO00300 401 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 DLGAP1O14490 977 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CLDN4O14493 209 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 COQ9O75208 318 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MFN2O95140 757 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 HNRNPCL4P0DMR1 293 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 CD247P20963 164 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 MAOAP21397 527 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR1E2P47887 323 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PPP2R2BQ00005 443 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 STX4Q12846 297 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SLC13A2Q13183 592 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 FAM111BQ6SJ93 734 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TMEM179BQ7Z7N9 219 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF595Q8IYB9 648 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 OR2L13Q8N349 312 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 EXD3Q8N9H8 876 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF675Q8TD23 568 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 APOBEC4Q8WW27 367 aaKnown RBP13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 BBC3Q96PG8 261 aaPredicted RBP13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ING2Q9H160 280 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TOR3AQ9H497 397 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ZNF696Q9H7X3 374 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 BCL2L10Q9HD36 194 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PRTFDC1Q9NRG1 225 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GIN1Q9NXP7 522 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 NDUFAF4Q9P032 175 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 NTMQ9P121 344 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 SLC13A4Q9UKG4 626 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PCDHGB3Q9Y5G1 929 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ENPP4Q9Y6X5 453 aa13.49□□□□□ -0.25
TNFRSF1A-204ENST00000440083 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 A6NL46 340 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 TMEM229AB2RXF0 380 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 PEX12O00623 359 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 IGHEP01854 428 aa13.48□□□□□ -0.25
TNFRSF1A-204ENST00000440083 ALPPP05187 535 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms