RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 OXA1LQ15070 435 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 DEPDC1Q5TB30 811 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TMIGD1Q6UXZ0 262 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 DNAJC14Q6Y2X3 702 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 LAPTM4BQ86VI4 370 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MCATQ8IVS2 390 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ENTHD1Q8IYW4 607 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 C10orf111Q8N326 155 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TBC1D19Q8N5T2 526 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 KCT2Q8NC54 265 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF540Q8NDQ6 660 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 BPIFB6Q8NFQ5 453 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 OR10G2Q8NGC3 310 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CT55Q8WUE5 264 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 APOBEC4Q8WW27 367 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 SMPDL3AQ92484 453 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 PMM1Q92871 262 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MMABQ96EY8 250 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 EGLN2Q96KS0 407 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF607Q96SK3 696 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CSF3RQ99062 836 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 DPH2Q9BQC3 489 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 NDC1Q9BTX1 674 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MS4A8Q9BY19 250 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF768Q9H5H4 540 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 OCEL1Q9H607 264 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MVB12BQ9H7P6 319 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 HCN3Q9P1Z3 774 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 WARS2Q9UGM6 360 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 EXO1Q9UQ84 846 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 SH3GLB1Q9Y371 365 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 FAM32AQ9Y421 112 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 V9GYQ6 96 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TNRC6AQ8NDV7 1962 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ADAMTS20P59510 1910 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 HIVEP3Q5T1R4 2406 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 A0A075B6Q4 140 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 A0A1W2PRB8 838 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZAR1LA6NP61 321 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 HAT1O14929 419 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ASNA1O43681 348 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 OR1F1O43749 312 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 GCM2O75603 506 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 SOX30O94993 753 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CCNB2O95067 398 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MED26O95402 600 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 IFNW1P05000 195 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 GSNP06396 782 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 OCM2P0CE71 109 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 OCMP0CE72 109 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF182P17025 639 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 NDUFS1P28331 727 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 RRM2P31350 389 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TGFBR2P37173 567 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 SLC15A1P46059 708 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 PRIM2P49643 509 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CCR8P51685 355 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 PPP5CP53041 499 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CRYBA2P53672 197 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MC2RQ01718 297 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 RELAQ04206 551 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 GAB1Q13480 694 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 IL10RAQ13651 578 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 NR1D2Q14995 579 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 OCLNQ16625 522 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 KHDRBS2Q5VWX1 349 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 WASH2PQ6VEQ5 465 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 SLC46A3Q7Z3Q1 461 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ANKRD46Q86W74 232 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 C17orf64Q86WR6 236 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 NUDT13Q86X67 352 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CLECL1Q8IZS7 167 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TMCO5AQ8N6Q1 288 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZSCAN1Q8NBB4 408 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 SRFBP1Q8NEF9 429 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 OR2L3Q8NG85 312 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 BBS10Q8TAM1 723 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 APH1BQ8WW43 257 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZNF501Q96CX3 271 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ZBED6CLQ96FA7 236 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 DCUN1D5Q9BTE7 237 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 EBPLQ9BY08 206 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 RUBCNLQ9H714 662 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 DDX31Q9H8H2 851 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CLN6Q9NWW5 311 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CHCHD3Q9NX63 227 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ANKRD10Q9NXR5 420 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 OR6C2Q9NZP2 312 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CALML5Q9NZT1 146 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 TRPC4Q9UBN4 977 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 MRPS2Q9Y399 296 aaKnown RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 DCHS2Q6V1P9 2916 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 ABCA12Q86UK0 2595 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 CREBBPQ92793 2442 aa4.44□□□□□ -1.7
EDEM3-203ENST00000439962 USP9YO00507 2555 aaPredicted RBP4.44□□□□□ -1.7
EDEM3-203ENST00000439962 A0A0J9YY10 115 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 TRBC2A0A5B9 178 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 PRR19A6NJB7 356 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 A8MUA0 341 aa4.43□□□□□ -1.7
EDEM3-203ENST00000439962 MYO1GB0I1T2 1018 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms