RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 IGKV1D-16P01601 117 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 KITP10721 976 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 BMP7P18075 431 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 TCEA1P23193 301 aaKnown RBP21.86■■□□□ 1.09
CPNE1-217ENST00000439669 SRD5A2P31213 254 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 PTGER4P35408 488 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 SOAT1P35610 550 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 MAP3K8P41279 467 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 CCT3P49368 545 aaKnown RBP21.86■■□□□ 1.09
CPNE1-217ENST00000439669 TP53BP2Q13625 1128 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 LASP1Q14847 261 aaKnown RBP21.86■■□□□ 1.09
CPNE1-217ENST00000439669 VASNQ6EMK4 673 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 ZCCHC12Q6PEW1 402 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 CAMKMTQ7Z624 323 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 PM20D2Q8IYS1 436 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 COX18Q8N8Q8 333 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 OR56A1Q8NGH5 318 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 TBL1XR1Q9BZK7 514 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 MANSC1Q9H8J5 431 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 SDHAF3Q9NRP4 125 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 TAS2R10Q9NYW0 307 aa21.86■■□□□ 1.09
CPNE1-217ENST00000439669 HMGN2P05204 90 aaKnown RBP21.85■■□□□ 1.09
CPNE1-217ENST00000439669 GRAMD1BQ3KR37 738 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 NHSL2Q5HYW2 709 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 DCST1Q5T197 706 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 OR4F3Q6IEY1 312 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 FIGNL1Q6PIW4 674 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 IFNEQ86WN2 208 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 LRRC34Q8IZ02 419 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 PSMA8Q8TAA3 256 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 MARVELD3Q96A59 401 aa21.85■■□□□ 1.09
CPNE1-217ENST00000439669 ARGLU1Q9NWB6 273 aaPredicted RBP21.85■■□□□ 1.09
CPNE1-217ENST00000439669 AHRRA9YTQ3 701 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 SDHDO14521 159 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 HDAC3O15379 428 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 ACTL6AO96019 429 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 SNRPB2P08579 225 aaKnown RBP21.84■■□□□ 1.09
CPNE1-217ENST00000439669 DPP4P27487 766 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 ACSF3Q4G176 576 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-217ENST00000439669 MARCH3Q86UD3 253 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 OR5AK3PQ8NH89 298 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 SFXN5Q8TD22 340 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 SFXN2Q96NB2 322 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 PRDM14Q9GZV8 571 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 DSN1Q9H410 356 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 FAF1Q9UNN5 650 aaPredicted RBP21.84■■□□□ 1.09
CPNE1-217ENST00000439669 CACNA1CQ13936 2221 aa21.84■■□□□ 1.09
CPNE1-217ENST00000439669 GOLGA8QA0A0J9YX86 632 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 GOLGA8OA6NCC3 632 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 TRPC5OSA6NMA1 111 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 GOLGA8NF8WBI6 632 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 C19orf84I3L1E1 186 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 KCNK2O95069 426 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 KIR3DL1P43629 444 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 HBA1P69905 142 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 POU6F2P78424 691 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-217ENST00000439669 OCRLQ01968 901 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 CDC73Q6P1J9 531 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 WDR75Q8IWA0 830 aaKnown RBP21.83■■□□□ 1.09
CPNE1-217ENST00000439669 CLECL1Q8IZS7 167 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 MOAP1Q96BY2 351 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 WDYHV1Q96HA8 205 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 ATP6V1G3Q96LB4 118 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 ACTRT3Q9BYD9 372 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 RTN4RQ9BZR6 473 aa21.83■■□□□ 1.09
CPNE1-217ENST00000439669 WDR55Q9H6Y2 383 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-217ENST00000439669 RPH3AQ9Y2J0 694 aaPredicted RBP21.83■■□□□ 1.09
CPNE1-217ENST00000439669 A0A0G2JNJ9 132 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 B4DXG7 233 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 FAM47E-STBD1D6RA91 191 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 SLCO1B7G3V0H7 640 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 KRT16P08779 473 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 COX6B1P14854 86 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 EPHA3P29320 983 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 ADH7P40394 386 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 ZFP36L2P47974 494 aaKnown RBP21.82■■□□□ 1.08
CPNE1-217ENST00000439669 SF3B4Q15427 424 aaKnown RBP eCLIP21.82■■□□□ 1.088e-8■■■■■ 28.6
CPNE1-217ENST00000439669 EXOSC6Q5RKV6 272 aaKnown RBP21.82■■□□□ 1.08
CPNE1-217ENST00000439669 CCNJQ5T5M9 372 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 OGFOD2Q6N063 350 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 AAGABQ6PD74 315 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 ENPP6Q6UWR7 440 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 GOLGA6L1Q8N7Z2 621 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 FADS6Q8N9I5 356 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 OR2M3Q8NG83 312 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 LILRB4Q8NHJ6 448 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 CDS1Q92903 461 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 STACQ99469 402 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 BTBD2Q9BX70 525 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 UCK2Q9BZX2 261 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 PIGUQ9H490 435 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 DUSP22Q9NRW4 184 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 MED11Q9P086 117 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 Q9UFV3 132 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 PCDHGB4Q9UN71 923 aa21.82■■□□□ 1.08
CPNE1-217ENST00000439669 NKX2-6A6NCS4 301 aa21.81■■□□□ 1.08
CPNE1-217ENST00000439669 RNASET2O00584 256 aaKnown RBP21.81■■□□□ 1.08
CPNE1-217ENST00000439669 ANGPTL1O95841 491 aa21.81■■□□□ 1.08
CPNE1-217ENST00000439669 CLNS1AP54105 237 aaKnown RBP21.81■■□□□ 1.08
CPNE1-217ENST00000439669 DSCR4P56555 118 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms