RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 EXOGQ9Y2C4 368 aaKnown RBP15.34■□□□□ 0.05
CLCNKA-203ENST00000439316 BOLA1Q9Y3E2 137 aa15.34■□□□□ 0.05
CLCNKA-203ENST00000439316 A0A1W2PPC1 479 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 IGLON5A6NGN9 336 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 C2CD4DB7Z1M9 353 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 EMC8O43402 210 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 KLF4O43474 513 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 HPGDSO60760 199 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 GUCY1B2O75343 617 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 IGHA1P01876 353 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 SLC2A2P11168 524 aaPredicted RBP15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 F3P13726 295 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 GNSP15586 552 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 CPN2P22792 545 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 ATP5A1P25705 553 aaKnown RBP15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 TRHRP34981 398 aaPredicted RBP15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 TRIM23P36406 574 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 STAT5AP42229 794 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 ARFIP1P53367 373 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 PRR5P85299 388 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 MLLT1Q03111 559 aaPredicted RBP15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 DSG2Q14126 1118 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 CCDC85BQ15834 202 aaPredicted RBP15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 C11orf74Q86VG3 221 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 OR4F15Q8NGB8 312 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 OR2L8Q8NGY9 312 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 KLK6Q92876 244 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 OSTF1Q92882 214 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 TEX101Q9BY14 249 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 SLC6A20Q9NP91 592 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 MED17Q9NVC6 651 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 CALML5Q9NZT1 146 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 PCDHGB7Q9Y5F8 929 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 STON1Q9Y6Q2 735 aa15.33■□□□□ 0.05
CLCNKA-203ENST00000439316 A0A1W2PS29 197 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 K7EQS6 105 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 PROM1O43490 865 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 AKAP8O43823 692 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 HLA-DPB1P04440 258 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 FAM157BP0CG42 384 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 CSNK2A2P19784 350 aaPredicted RBP15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 PRKAR1BP31321 381 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 SEC13P55735 322 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 MADCAM1Q13477 382 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 DECR1Q16698 335 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 PGGHGQ32M88 737 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 YIF1BQ5BJH7 314 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 TRIQKQ629K1 86 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 SLC30A6Q6NXT4 461 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 SLC48A1Q6P1K1 146 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 MARCH9Q86YJ5 346 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 TCTE3Q8IZS6 198 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 Q8N402 240 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 KLHL36Q8N4N3 616 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 OR52N1Q8NH53 320 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 ACOT11Q8WXI4 607 aaPredicted RBP15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 ZG16BQ96DA0 208 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 MACROD1Q9BQ69 325 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 JAM3Q9BX67 310 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 B3GAT2Q9NPZ5 323 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 RBFOX1Q9NWB1 397 aaKnown RBP15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 IL20Q9NYY1 176 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 POLHQ9Y253 713 aa15.33■□□□□ 0.04
CLCNKA-203ENST00000439316 SHISA3A0PJX4 238 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 GPR89AB7ZAQ6 455 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 GABRPO00591 440 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 CHST10O43529 356 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 TRIM3O75382 744 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 GPR89BP0CG08 455 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 C8orf89P0DMQ9 161 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 HOXB3P14651 431 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 MC3RP41968 323 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 EVX1P49640 407 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 CEBPEQ15744 281 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 C18orf63Q68DL7 685 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 VASNQ6EMK4 673 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 PLET1Q6UQ28 207 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 ZNF438Q7Z4V0 828 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 FAM20CQ8IXL6 584 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 UBE2J2Q8N2K1 259 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 DUSP18Q8NEJ0 188 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 NUP43Q8NFH3 380 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 OR2L5Q8NG80 312 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 UBASH3BQ8TF42 649 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 TMED9Q9BVK6 235 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 RAB11FIP5Q9BXF6 653 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 MRPS30Q9NP92 439 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 ASB6Q9NWX5 421 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 MAU2Q9Y6X3 613 aa15.32■□□□□ 0.04
CLCNKA-203ENST00000439316 ZIC2O95409 532 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 CH25HO95992 272 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 CCNYL3P0C7X3 344 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 CFL1P23528 166 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 CERS1P27544 350 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 HTR1FP30939 366 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 IFNA8P32881 189 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 CTHP32929 405 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 AHRP35869 848 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 CD83Q01151 205 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TGM3Q08188 693 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms