RNA–Protein interactions for RNA: ENST00000439079.1

LINC00415-201, long intergenic non-protein coding RNA 415, humanhuman

TSL 3 BASIC

Gene LINC00415, Length 435 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00415-201ENST00000439079 ASCC3Q8N3C0 2202 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 TRGV11A0A075B6L2 103 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 TRAV18A0A075B6X5 111 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 C1orf232A0A0U1RR37 186 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 A0A1W2PPK0 400 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 PLSCR5A0PG75 271 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 MTMR11A4FU01 709 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 WASHC1A8K0Z3 465 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 POC1B-GALNT4F8VUJ3 575 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 FOXE1O00358 373 aaPredicted RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 BTN3A3O00478 584 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 BCKDKO14874 412 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 CHUKO15111 745 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 PLPP2O43688 288 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 TLX3O43711 291 aaPredicted RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 OR1F1O43749 312 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 NOBOXO60393 691 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 LDB3O75112 727 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 TM7SF2O76062 418 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 RPSAP08865 295 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 SMIM10L2AP0DMW4 78 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 SMIM10L2BP0DMW5 78 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 HOXB8P17481 243 aaPredicted RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 POLR2CP19387 275 aaPredicted RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 UQCRC2P22695 453 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 HOXA9P31269 272 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 SLC1A4P43007 532 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 NOVP48745 357 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 POU3F4P49335 361 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 GEMP55040 296 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 MAZP56270 477 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ARPC4P59998 168 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 PPIAP62937 165 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 HERV-K104P63124 156 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 HERVK_113P63132 956 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ERVK-8P63133 956 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 SKP1P63208 163 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 BDH1Q02338 343 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 NHLH2Q02577 135 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 CDH17Q12864 832 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 STIM1Q13586 685 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 CRMP1Q14194 572 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 UAP1Q16222 522 aaPredicted RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 SYPL1Q16563 259 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 PAGE2BQ5JRK9 111 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 CEP78Q5JTW2 689 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 THEM4Q5T1C6 240 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 NDUFAF5Q5TEU4 345 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 FAM71F2Q6NXP2 309 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 CCDC137Q6PK04 289 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 SASS6Q6UVJ0 657 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 VITQ6UXI7 678 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 NDUFAF7Q7L592 441 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 H2BFWTQ7Z2G1 175 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 DCXRQ7Z4W1 244 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 FAM124AQ86V42 546 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 SFR1Q86XK3 245 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 TXNDC5Q8NBS9 432 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 RNF149Q8NC42 400 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 DDHD1Q8NEL9 900 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 PROKR2Q8NFJ6 384 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 RDM1Q8NG50 284 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 OR6M1Q8NGM8 313 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 OR14A16Q8NHC5 309 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 PPTC7Q8NI37 304 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 RHEBL1Q8TAI7 183 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 REPS1Q96D71 796 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ZG16BQ96DA0 208 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ECHDC3Q96DC8 303 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 CERS2Q96G23 380 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 AKR1E2Q96JD6 320 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ALS2CR12Q96Q35 445 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 TAAR1Q96RJ0 339 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 GFI1Q99684 422 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 CMKLR1Q99788 373 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 TRMT61BQ9BVS5 477 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ERVK-6Q9BXR3 956 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 METTL8Q9H825 291 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 GALNT9Q9HCQ5 603 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ZNF302Q9NR11 478 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 LYARQ9NX58 379 aaKnown RBP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 CYTH4Q9UIA0 394 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 IKZF2Q9UKS7 526 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 FBXO4Q9UKT5 387 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 DDX19BQ9UMR2 479 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ABCG2Q9UNQ0 655 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 RHBDD3Q9Y3P4 386 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 NOX1Q9Y5S8 564 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 PUS1Q9Y606 427 aaKnown RBP eCLIP4.31□□□□□ -1.72
LINC00415-201ENST00000439079 ATG2BQ96BY7 2078 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 SHROOM3Q8TF72 1996 aa4.31□□□□□ -1.72
LINC00415-201ENST00000439079 A0A0A0MQY5 61 aa4.3□□□□□ -1.72
LINC00415-201ENST00000439079 NPEPPSL1A6NEC2 478 aa4.3□□□□□ -1.72
LINC00415-201ENST00000439079 MGAT4DA6NG13 374 aa4.3□□□□□ -1.72
LINC00415-201ENST00000439079 SERPINE3A8MV23 424 aa4.3□□□□□ -1.72
LINC00415-201ENST00000439079 CENPBD1B2RD01 187 aa4.3□□□□□ -1.72
LINC00415-201ENST00000439079 TMEM189-UBE2V1I3L0A0 370 aa4.3□□□□□ -1.72
LINC00415-201ENST00000439079 I6L893 689 aaPredicted RBP4.3□□□□□ -1.72
LINC00415-201ENST00000439079 LEFTY2O00292 366 aa4.3□□□□□ -1.72
LINC00415-201ENST00000439079 ITGB1BP1O14713 200 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms