RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SFTPBP07988 381 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 IGFBP1P08833 259 aaPredicted RBP9.55□□□□□ -0.88
RTN4-211ENST00000438462 GPX3P22352 226 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 CPN2P22792 545 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 CDK5R2Q13319 367 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 GANABQ14697 944 aaKnown RBP9.55□□□□□ -0.88
RTN4-211ENST00000438462 PIWIL4Q7Z3Z4 852 aaKnown RBP9.55□□□□□ -0.88
RTN4-211ENST00000438462 RIBC1Q8N443 379 aaPredicted RBP9.55□□□□□ -0.88
RTN4-211ENST00000438462 FADS6Q8N9I5 356 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 OR2M3Q8NG83 312 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 OR8K1Q8NGG5 319 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 FBXO30Q8TB52 745 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.55□□□□□ -0.88
RTN4-211ENST00000438462 SLC47A1Q96FL8 570 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 PPP1R2P1Q96PQ5 205 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 CHIAQ9BZP6 476 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 TOR3AQ9H497 397 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 MARCH7Q9H992 704 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 LRRC40Q9H9A6 602 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 DYNLRB1Q9NP97 96 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 SLC6A13Q9NSD5 602 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 PPP4R1LQ9P1A2 415 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 ADAMTS6Q9UKP5 1117 aa9.55□□□□□ -0.88
RTN4-211ENST00000438462 H3BMM5 538 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 H7C0C1 242 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 hCG_2039718K7EN88 272 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 IL33O95760 270 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 OPN1LWP04000 364 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 FUT4P22083 530 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 ACHEP22303 614 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 OR3A2P47893 321 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 ATP5OP48047 213 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 RFX3P48380 749 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 ATP4BP51164 291 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 CLCN7P51798 805 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 GAS1P54826 345 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 HNRNPH2P55795 449 aaKnown RBP9.54□□□□□ -0.88
RTN4-211ENST00000438462 TFDP2Q14188 446 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 TTLL9Q3SXZ7 439 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 ODF2Q5BJF6 829 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 E4F1Q66K89 784 aaPredicted RBP9.54□□□□□ -0.88
RTN4-211ENST00000438462 CYHR1Q6ZMK1 362 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 WDFY1Q8IWB7 410 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 OTUD6BQ8N6M0 293 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 ZNF615Q8N8J6 731 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 OR2V1Q8NHB1 315 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 LPGAT1Q92604 370 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 RAB39BQ96DA2 213 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 TMCO6Q96DC7 493 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 PELOQ9BRX2 385 aaKnown RBP9.54□□□□□ -0.88
RTN4-211ENST00000438462 MCMBPQ9BTE3 642 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 TBCDQ9BTW9 1192 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 OR10A5Q9H207 317 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 PELI2Q9HAT8 420 aa9.54□□□□□ -0.88
RTN4-211ENST00000438462 ZNF275Q9NSD4 429 aaPredicted RBP9.54□□□□□ -0.88
RTN4-211ENST00000438462 CIB4A0PJX0 185 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 SH3PXD2BA1X283 911 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 CCDC151A5D8V7 595 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 LRRC53A6NM62 1247 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 SRRM5B3KS81 715 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 PIP5K1BO14986 540 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 GPR37O15354 613 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 GUCA1CO95843 209 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 TBX6O95947 436 aaPredicted RBP9.53□□□□□ -0.88
RTN4-211ENST00000438462 F13BP05160 661 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 F7P08709 466 aaPredicted RBP9.53□□□□□ -0.88
RTN4-211ENST00000438462 COL8A2P25067 703 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 CDKN2BP42772 138 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 SLC1A3P43003 542 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 RNPS1Q15287 305 aaKnown RBP9.53□□□□□ -0.88
RTN4-211ENST00000438462 ZNF239Q16600 458 aaKnown RBP9.53□□□□□ -0.88
RTN4-211ENST00000438462 ARL13AQ5H913 290 aaPredicted RBP9.53□□□□□ -0.88
RTN4-211ENST00000438462 LGSNQ5TDP6 509 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 KRT77Q7Z794 578 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 TREML1Q86YW5 311 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 MPP5Q8N3R9 675 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 DEFB108BQ8NET1 73 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 JADE3Q92613 823 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 ITPAQ9BY32 194 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 PRDM7Q9NQW5 492 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 RIMKLBQ9ULI2 386 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 CRYL1Q9Y2S2 319 aa9.53□□□□□ -0.88
RTN4-211ENST00000438462 HERC1Q15751 4861 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 IGHV3OR16-10A0A075B7F0 116 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 CT62P0C5K7 136 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 LCN2P80188 198 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 SLC25A3Q00325 362 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 BIKQ13323 160 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 KRT31Q15323 416 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 ADPRMQ3LIE5 342 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 HBMQ6B0K9 141 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 PGBD2Q6P3X8 592 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 SLC16A11Q8NCK7 471 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 OR56A3Q8NH54 315 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 YIPF5Q969M3 257 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 ZNF837Q96EG3 531 aaPredicted RBP9.52□□□□□ -0.89
RTN4-211ENST00000438462 NAP1L3Q99457 506 aaPredicted RBP9.52□□□□□ -0.89
RTN4-211ENST00000438462 DOK1Q99704 481 aa9.52□□□□□ -0.89
RTN4-211ENST00000438462 RPF2Q9H7B2 306 aaKnown RBP9.52□□□□□ -0.89
RTN4-211ENST00000438462 SIRT3Q9NTG7 399 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms