RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 FBXL3Q9UKT7 428 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 RPS26P11Q5JNZ5 115 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 CLECL1Q8IZS7 167 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 OR5J2Q8NH18 312 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 OR5K2Q8NHB8 316 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 PRR11Q96HE9 360 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 ZBED3Q96IU2 234 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 H2AFB2P0C5Z0 115 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 AHRP35869 848 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 CDKN2CP42773 168 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 ARF3P61204 181 aaPredicted RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 DEFB103AP81534 67 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 ARF1P84077 181 aaKnown RBP14.99□□□□□ -0.01
PTPN13-204ENST00000436978 OR5H2Q8NGV7 314 aa14.99□□□□□ -0.01
PTPN13-204ENST00000436978 SMCO3A2RU48 225 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 AGAP5A6NIR3 686 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 VEZF1Q14119 521 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 NFATC4Q14934 902 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF423Q2M1K9 1284 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 PLBD1Q6P4A8 553 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 HSD11B1LQ7Z5J1 315 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 NRMQ8IXM6 262 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 IL17CQ9P0M4 197 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 PTRH2Q9Y3E5 179 aaKnown RBP14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ZCWPW2A0A1B0GU75 182 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 C18orf21Q32NC0 220 aaPredicted RBP14.98□□□□□ -0.01
PTPN13-204ENST00000436978 KIAA0513O60268 411 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 MAS1P04201 325 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 EPHA4P54764 986 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 EMP2P54851 167 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 TGFBR3Q03167 851 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 KEAP1Q14145 624 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 BIRC8Q96P09 236 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 DEFB110Q30KQ9 67 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 PROX2Q3B8N5 592 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ACOT4Q8N9L9 421 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 RADILQ96JH8 1075 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 M0R233 179 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 SLC1A7O00341 560 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 CREBL2O60519 120 aaPredicted RBP14.98□□□□□ -0.01
PTPN13-204ENST00000436978 PPP1R3DO95685 299 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 CNTN4Q8IWV2 1026 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 MGLLQ99685 303 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ACAD8Q9UKU7 415 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF337Q9Y3M9 751 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 LOC285095A0A1B0GVY8 99 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 LATO43561 262 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 MSX1P28360 303 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 GJA5P36382 358 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 NADSYN1Q6IA69 706 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 MFSD6LQ8IWD5 586 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 NEIL2Q969S2 332 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 CCNL2Q96S94 520 aaPredicted RBP14.98□□□□□ -0.01
PTPN13-204ENST00000436978 SYT3Q9BQG1 590 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 OR10A5Q9H207 317 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 OR10A2Q9H208 303 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ARMC1Q9NVT9 282 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 HIF3AQ9Y2N7 669 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ATAD5Q96QE3 1844 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 CENPBD1B2RD01 187 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 GCH1P30793 250 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ARL3P36405 182 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 MAGEA6P43360 314 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 MARCH8Q5T0T0 291 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 RCBTB1Q8NDN9 531 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 OR4K13Q8NH42 304 aa14.98□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF578Q96N58 590 aaPredicted RBP14.98□□□□□ -0.01
PTPN13-204ENST00000436978 SDR39U1Q9NRG7 319 aaPredicted RBP14.98□□□□□ -0.01
PTPN13-204ENST00000436978 OR2T1O43869 369 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 MAN2A2P49641 1150 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 RPP30P78346 268 aaKnown RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 PARS2Q7L3T8 475 aaKnown RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 GCDHQ92947 438 aaPredicted RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 TREX1Q9NSU2 369 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 UBQLN2Q9UHD9 624 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 BOKQ9UMX3 212 aaPredicted RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 MS4A4AQ96JQ5 239 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 PCBD1P61457 104 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 FAM26DQ5JW98 314 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 TRIM73Q86UV7 250 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 GALNT6Q8NCL4 622 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 OR14A16Q8NHC5 309 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 TRIM43Q96BQ3 446 aaPredicted RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 PCDH17O14917 1159 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 POU3F2P20265 443 aaPredicted RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 EIF2B1Q14232 305 aaKnown RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 DCST2Q5T1A1 773 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 CPZQ66K79 652 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 PAPD5Q8NDF8 572 aaKnown RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 RBM24Q9BX46 236 aaKnown RBP14.97□□□□□ -0.01
PTPN13-204ENST00000436978 ZNF226Q9NYT6 803 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 USP3Q9Y6I4 520 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 RAB3BP20337 219 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 ADH6P28332 368 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 DCAF12Q5T6F0 453 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 C6orf89Q6UWU4 347 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 MDGA1Q8NFP4 955 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 PTERQ96BW5 349 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 PEX14O75381 377 aa14.97□□□□□ -0.01
PTPN13-204ENST00000436978 XKR5Q6UX68 686 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms