RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 OR52P1PQ8NH57 321 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 THAP3Q8WTV1 239 aaPredicted RBP21.24■□□□□ 0.99
CPSF4-204ENST00000436336 ZG16BQ96DA0 208 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 LIN28AQ9H9Z2 209 aaKnown RBP21.24■□□□□ 0.99
CPSF4-204ENST00000436336 WDR70Q9NW82 654 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 MYOTQ9UBF9 498 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 DCHS1Q96JQ0 3298 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 AGAP5A6NIR3 686 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 H0Y3Z8 333 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 RPS4Y1P22090 263 aaKnown RBP21.23■□□□□ 0.99
CPSF4-204ENST00000436336 ABCD3P28288 659 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 KRT20P35900 424 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 PLCXD2Q0VAA5 305 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 RCN1Q15293 331 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 DUSP7Q16829 419 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 FKBP9P1Q75LS8 142 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 VTCN1Q7Z7D3 282 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 DIO2Q92813 273 aa21.23■□□□□ 0.99
CPSF4-204ENST00000436336 DBIP07108 87 aaKnown RBP21.22■□□□□ 0.99
CPSF4-204ENST00000436336 THBS1P07996 1170 aa21.22■□□□□ 0.99
CPSF4-204ENST00000436336 LCN1P31025 176 aa21.22■□□□□ 0.99
CPSF4-204ENST00000436336 ZNF311Q5JNZ3 666 aa21.22■□□□□ 0.99
CPSF4-204ENST00000436336 TCTN3Q6NUS6 607 aa21.22■□□□□ 0.99
CPSF4-204ENST00000436336 PRR22Q8IZ63 422 aa21.22■□□□□ 0.99
CPSF4-204ENST00000436336 EFHD2Q96C19 240 aaPredicted RBP21.22■□□□□ 0.99
CPSF4-204ENST00000436336 OMA1Q96E52 524 aa21.22■□□□□ 0.99
CPSF4-204ENST00000436336 PINK1Q9BXM7 581 aa21.22■□□□□ 0.99
CPSF4-204ENST00000436336 ZNF232Q9UNY5 417 aa21.22■□□□□ 0.99
CPSF4-204ENST00000436336 WWP2O00308 870 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 TSPAN2O60636 221 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 REM1O75628 298 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 UGT2B17O75795 530 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 SEMG1P04279 462 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 FESP07332 822 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 IL7RP16871 459 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 IL12BP29460 328 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 PRKAR1BP31321 381 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 ID4P47928 161 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 KCNJ10P78508 379 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 IFI44LQ53G44 452 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 HMGN2P46Q86SG4 172 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 GPR32P1Q8NGA4 272 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 FGF11Q92914 225 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 RSPO3Q9BXY4 272 aaPredicted RBP21.21■□□□□ 0.99
CPSF4-204ENST00000436336 YY1AP1Q9H869 796 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 RNPEPL1Q9HAU8 725 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 NPFFR2Q9Y5X5 522 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 DOCK10Q96BY6 2186 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 NPIPA5A0A0B4J1W7 369 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 NPIPA7E9PJI5 369 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 HNRNPRO43390 633 aaKnown RBP21.21■□□□□ 0.99
CPSF4-204ENST00000436336 NADKO95544 446 aaPredicted RBP21.21■□□□□ 0.99
CPSF4-204ENST00000436336 SERPINA7P05543 415 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 NPIPA8P0DM63 369 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 DCTP40126 519 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 PNLIPRP2P54317 469 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 ATP12AP54707 1039 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 Q0VFX4 171 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 CHAF1BQ13112 559 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 LARS2Q15031 903 aaKnown RBP21.21■□□□□ 0.99
CPSF4-204ENST00000436336 FBXW10Q5XX13 1052 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 DHRS4L2Q6PKH6 230 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 C16orf47Q6ZP98 133 aaPredicted RBP21.21■□□□□ 0.99
CPSF4-204ENST00000436336 VRK2Q86Y07 508 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 KBTBD2Q8IY47 623 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 SLC22A8Q8TCC7 542 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 OIT3Q8WWZ8 545 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 PROX1Q92786 737 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 ZNF354BQ96LW1 612 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 CHID1Q9BWS9 393 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 HOXD1Q9GZZ0 328 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 STX18Q9P2W9 335 aaKnown RBP21.21■□□□□ 0.99
CPSF4-204ENST00000436336 KCNE5Q9UJ90 142 aa21.21■□□□□ 0.99
CPSF4-204ENST00000436336 ZNF443Q9Y2A4 671 aaPredicted RBP21.21■□□□□ 0.99
CPSF4-204ENST00000436336 PIEZO1Q92508 2521 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 NPIPB9F8W1W9 429 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 TPST1O60507 370 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 ITGAMP11215 1152 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 NAGAP17050 411 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 ZNF141Q15928 474 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 MAPK14Q16539 360 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 LIN52Q52LA3 116 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 SLC15A4Q8N697 577 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 GEMIN6Q8WXD5 167 aaKnown RBP21.2■□□□□ 0.98
CPSF4-204ENST00000436336 FER1L6-AS2Q96M78 137 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 ADOQ96SZ5 270 aa21.2■□□□□ 0.98
CPSF4-204ENST00000436336 RYDENQ9NUL5 291 aaKnown RBP21.2■□□□□ 0.98
CPSF4-204ENST00000436336 MASP2O00187 686 aa21.19■□□□□ 0.98
CPSF4-204ENST00000436336 SYT5O00445 386 aa21.19■□□□□ 0.98
CPSF4-204ENST00000436336 ANPEPP15144 967 aa21.19■□□□□ 0.98
CPSF4-204ENST00000436336 DCAF10Q5QP82 559 aa21.19■□□□□ 0.98
CPSF4-204ENST00000436336 ARMC10Q8N2F6 343 aa21.19■□□□□ 0.98
CPSF4-204ENST00000436336 IL1RAPQ9NPH3 570 aa21.19■□□□□ 0.98
CPSF4-204ENST00000436336 UBQLN4Q9NRR5 601 aa21.19■□□□□ 0.98
CPSF4-204ENST00000436336 SH3GLB1Q9Y371 365 aa21.19■□□□□ 0.98
CPSF4-204ENST00000436336 CENPVL1A0A0U1RR11 272 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 OR6C70A6NIJ9 312 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 ZNF354AO60765 605 aaPredicted RBP21.18■□□□□ 0.98
CPSF4-204ENST00000436336 ABCB7O75027 752 aa21.18■□□□□ 0.98
CPSF4-204ENST00000436336 PPM1BO75688 479 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms