RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 HACD4Q5VWC8 232 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 PRAMEF9Q5VWM5 478 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 PAPD4Q6PIY7 484 aaKnown RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 FAM83HQ6ZRV2 1179 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 H1FNTQ75WM6 255 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 KCTD20Q7Z5Y7 419 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 TAF8Q7Z7C8 310 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 SERINC5Q86VE9 423 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 TRIM48Q8IWZ4 208 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 ADGRG2Q8IZP9 1017 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 CLECL1Q8IZS7 167 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF557Q8N988 423 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 OR9Q2Q8NGE9 314 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 BAHD1Q8TBE0 780 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 SPPL2AQ8TCT8 520 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 ADAD1Q96M93 576 aaKnown RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF578Q96N58 590 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 LYSMD1Q96S90 227 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 C17orf62Q9BQA9 187 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 POLDIP3Q9BY77 421 aaKnown RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 POLR2J2Q9GZM3 115 aaKnown RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 KCNN2Q9H2S1 579 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 TRIM45Q9H8W5 580 aaPredicted RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 EXOSC4Q9NPD3 245 aaKnown RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 HCFC1R1Q9NWW0 138 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 SLC23A1Q9UHI7 598 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 NDRG2Q9UN36 371 aaKnown RBP7.58□□□□□ -1.2
VTI1A-202ENST00000432306 VPS4AQ9UN37 437 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 SLC6A14Q9UN76 642 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 ST3GAL5Q9UNP4 418 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF451Q9Y4E5 1061 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 SNX11Q9Y5W9 270 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 KCNE2Q9Y6J6 123 aa7.58□□□□□ -1.2
VTI1A-202ENST00000432306 TRDV1A0A1B0GX56 115 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 RPS10-NUDT3A0A1W2PQS6 291 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 STMND1H3BQB6 276 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GFYI3L273 518 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PCDH17O14917 1159 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GRM6O15303 877 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 EFSO43281 561 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PCDH7O60245 1069 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 ACSL4O60488 711 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 SNAPC5O75971 98 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GADD45GO95257 159 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PRAMEF1O95521 474 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GASTP01350 101 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 SLC2A2P11168 524 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 LAMP1P11279 417 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 SRCP12931 536 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GCH1P30793 250 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GABRA5P31644 462 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 SOX3P41225 446 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 NBL1P41271 181 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 NSG1P42857 185 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 RAG2P55895 527 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 YPEL5P62699 121 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 LMAN2Q12907 356 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 HNRNPA0Q13151 305 aaKnown RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PDE7AQ13946 482 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 FGL2Q14314 439 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GPR68Q15743 365 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GRK1Q15835 563 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PAN2Q504Q3 1202 aaKnown RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 SGO1Q5FBB7 561 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 ATXN7L2Q5T6C5 722 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 TRIQKQ629K1 86 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 FAM122CQ6P4D5 195 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 CLEC2AQ6UVW9 174 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PAMR1Q6UXH9 720 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 MRGPREQ86SM8 312 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 GPAT4Q86UL3 456 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 CIR1Q86X95 450 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 ADGRG3Q86Y34 549 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 NAGSQ8N159 534 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 OXR1Q8N573 874 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF485Q8NCK3 441 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 SMRP1Q8NCR6 262 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 C19orf18Q8NEA5 215 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 ZNF680Q8NEM1 530 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 ATP6V1C2Q8NEY4 427 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 OR7D4Q8NG98 312 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 UBASH3BQ8TF42 649 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PIH1D2Q8WWB5 315 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 UCN3Q969E3 161 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 SCMH1Q96GD3 660 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 CMTM3Q96MX0 182 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 FUZQ9BT04 418 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PHF7Q9BWX1 381 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 TWSG1Q9GZX9 223 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 NMNAT1Q9HAN9 279 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 FGF20Q9NP95 211 aaPredicted RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 DNAJC11Q9NVH1 559 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 ZSCAN32Q9NX65 697 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 MRPL15Q9P015 296 aaKnown RBP7.57□□□□□ -1.2
VTI1A-202ENST00000432306 VPS29Q9UBQ0 182 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 LHX3Q9UBR4 397 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 CLEC2DQ9UHP7 191 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 FKBP7Q9Y680 259 aa7.57□□□□□ -1.2
VTI1A-202ENST00000432306 PRSS21Q9Y6M0 314 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms