RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 KRT6CP48668 564 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 PTH2RP49190 550 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 WNT3P56703 355 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 SRYQ05066 204 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 GALNT1Q10472 559 aaPredicted RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 TRAF3Q13114 568 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 TRMT12Q53H54 448 aaKnown RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 SPIN4Q56A73 249 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 TECRLQ5HYJ1 363 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 FAM111BQ6SJ93 734 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 LARP4Q71RC2 724 aaKnown RBP eCLIP7.46□□□□□ -1.22
CDH13-203ENST00000431540 BTLAQ7Z6A9 289 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 CMC1Q7Z7K0 106 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 STK32CQ86UX6 486 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 RNF175Q8N4F7 328 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 SPATA4Q8NEY3 305 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 ADCY4Q8NFM4 1077 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 OR52R1Q8NGF1 315 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 FAM76AQ8TAV0 307 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 ACTRT2Q8TDY3 377 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 KCTD4Q8WVF5 259 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 EXT2Q93063 718 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 TMBIM1Q969X1 311 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 KLHL29Q96CT2 875 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 C11orf24Q96F05 449 aaPredicted RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 CNRIP1Q96F85 164 aaPredicted RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 TRMT61AQ96FX7 289 aaKnown RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 FAM111AQ96PZ2 611 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 MRPL1Q9BYD6 325 aaKnown RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 TRIM31Q9BZY9 425 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 IQCGQ9H095 443 aaKnown RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 LRTM1Q9HBL6 345 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 FAM120CQ9NX05 1096 aaKnown RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 GRHL1Q9NZI5 618 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 DKKL1Q9UK85 242 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 PCTPQ9UKL6 214 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 UTS2RQ9UKP6 389 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 PROCRQ9UNN8 238 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 DTX4Q9Y2E6 619 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 EMC9Q9Y3B6 208 aa7.46□□□□□ -1.22
CDH13-203ENST00000431540 NUP214P35658 2090 aaPredicted RBP7.46□□□□□ -1.22
CDH13-203ENST00000431540 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 HMX2A2RU54 273 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 OVOL3O00110 214 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 ADAMDEC1O15204 470 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 KLF4O43474 513 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 ULK1O75385 1050 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 LRATO95237 230 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 RPS17P08708 135 aaKnown RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 BMP4P12644 408 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 PSMB1P20618 241 aaKnown RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 FEN1P39748 380 aaKnown RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 STARP49675 285 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 PLTPP55058 493 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 GNG11P61952 73 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 PRR5P85299 388 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 RASA2Q15283 850 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 DECR1Q16698 335 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 TMEM44Q2T9K0 475 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 PDSS1Q5T2R2 415 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 LGSNQ5TDP6 509 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 MROH9Q5TGP6 573 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 PRR22Q8IZ63 422 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 STEAP2Q8NFT2 490 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 OR2M3Q8NG83 312 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 OR4F6Q8NGB9 312 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 OR4K17Q8NGC6 315 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 OR52B6Q8NGF0 335 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 UHMK1Q8TAS1 419 aaKnown RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 ZNF483Q8TF39 744 aaPredicted RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 SELENOMQ8WWX9 145 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 PIK3IP1Q96FE7 263 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 ZNF764Q96H86 408 aaPredicted RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 ADOQ96SZ5 270 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 MDFIQ99750 246 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 TACO1Q9BSH4 297 aaKnown RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 MRPL46Q9H2W6 279 aaKnown RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 ACSS3Q9H6R3 686 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 L2HGDHQ9H9P8 463 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 ZBTB26Q9HCK0 441 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 GALNT9Q9HCQ5 603 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 SLC35C2Q9NQQ7 365 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 PPP4R1LQ9P1A2 415 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 ZNF180Q9UJW8 692 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 C19orf53Q9UNZ5 99 aaPredicted RBP7.45□□□□□ -1.22
CDH13-203ENST00000431540 SLC12A4Q9UP95 1085 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 ZNF337Q9Y3M9 751 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 PLCE1Q9P212 2302 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 STAB1Q9NY15 2570 aa7.45□□□□□ -1.22
CDH13-203ENST00000431540 MYO1GB0I1T2 1018 aa7.44□□□□□ -1.22
CDH13-203ENST00000431540 HS3ST1O14792 307 aa7.44□□□□□ -1.22
CDH13-203ENST00000431540 PAX4O43316 350 aa7.44□□□□□ -1.22
CDH13-203ENST00000431540 SS18L1O75177 396 aaPredicted RBP7.44□□□□□ -1.22
CDH13-203ENST00000431540 SMNDC1O75940 238 aaKnown RBP eCLIP7.44□□□□□ -1.22
CDH13-203ENST00000431540 SIX3O95343 332 aaPredicted RBP7.44□□□□□ -1.22
CDH13-203ENST00000431540 IL33O95760 270 aa7.44□□□□□ -1.22
CDH13-203ENST00000431540 PDYNP01213 254 aa7.44□□□□□ -1.22
CDH13-203ENST00000431540 GBAP04062 536 aa7.44□□□□□ -1.22
CDH13-203ENST00000431540 ADH6P28332 368 aa7.44□□□□□ -1.22
CDH13-203ENST00000431540 EVI2BP34910 448 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms