RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 VMP1Q96GC9 406 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 CENPNQ96H22 339 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-206ENST00000431390 LCORQ96JN0 433 aaPredicted RBP16.87■□□□□ 0.29
HMGN1-206ENST00000431390 PINK1Q9BXM7 581 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 NRSN2Q9GZP1 204 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 CACYBPQ9HB71 228 aaKnown RBP16.87■□□□□ 0.29
HMGN1-206ENST00000431390 MKLN1Q9UL63 735 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 CBLCQ9ULV8 474 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 IFT52Q9Y366 437 aa16.87■□□□□ 0.29
HMGN1-206ENST00000431390 C2orf92A0A1B0GVN3 265 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 A0A1W2PQ72 361 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 C21orf140B9A014 251 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 STMND1H3BQB6 276 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 CLOCKO15516 846 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 MT-ND1P03886 318 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 FESP07332 822 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 PSPHP78330 225 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 FIGNL1Q6PIW4 674 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 IGF2-ASQ6U949 168 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 AMIGO2Q86SJ2 522 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 PEX5LQ8IYB4 626 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 ZSCAN1Q8NBB4 408 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 APCDD1LQ8NCL9 501 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 GPR32P1Q8NGA4 272 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 NRG4Q8WWG1 115 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 PROX1Q92786 737 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 C7orf34Q96L11 122 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 ZNF354BQ96LW1 612 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 G6PC3Q9BUM1 346 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 BDH2Q9BUT1 245 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 DNAJB9Q9UBS3 223 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 TCFL5Q9UL49 500 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 FARSAQ9Y285 508 aaKnown RBP16.86■□□□□ 0.29
HMGN1-206ENST00000431390 OR10H1Q9Y4A9 318 aa16.86■□□□□ 0.29
HMGN1-206ENST00000431390 RAD1O60671 282 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 SEC24DO94855 1032 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 PRSS23O95084 383 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 THBS1P07996 1170 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 PLA2G2AP14555 144 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 ATP6V1C1P21283 382 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 RPS4Y1P22090 263 aaKnown RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 MMP11P24347 488 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 PRKAR1BP31321 381 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 VHLP40337 213 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 STAT5AP42229 794 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 SLC26A5P58743 744 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 RPS15P62841 145 aaKnown RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 VLDLRP98155 873 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 KCNC4Q03721 635 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 OGFRL1Q5TC84 451 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 HLA-DQA1Q5Y7H0 255 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 DHRS4L2Q6PKH6 230 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 OR4N2Q8NGD1 307 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 OR8K3Q8NH51 312 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 OR52P1PQ8NH57 321 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 SNIP1Q8TAD8 396 aaKnown RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 APOBEC4Q8WW27 367 aaKnown RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 C8orf44Q96CB5 159 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 MESP1Q9BRJ9 268 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 GPR87Q9BY21 358 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 WWTR1Q9GZV5 400 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 ZNF700Q9H0M5 742 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 SEMA6AQ9H2E6 1030 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 VCX3BQ9H321 246 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 THSD1Q9NS62 852 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 HS3ST3B1Q9Y662 390 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 AGAP5A6NIR3 686 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 CDRT15L2A8MXV6 281 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 SYT5O00445 386 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 TO15178 435 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 CST1P01037 141 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 ITGA2P17301 1181 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 RBMS1P29558 406 aaKnown RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 DNASE1L3Q13609 305 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 PCOLCEQ15113 449 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 GPR68Q15743 365 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 IQCCQ4KMZ1 466 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 ZNF311Q5JNZ3 666 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 HSDL2Q6YN16 418 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 BCORP1Q8N888 145 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 ZNF441Q8N8Z8 693 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 NACC2Q96BF6 587 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 GAL3ST4Q96RP7 486 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 RSPO3Q9BXY4 272 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 QRSL1Q9H0R6 528 aaKnown RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 NXF5Q9H1B4 397 aaKnown RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 FBXO34Q9NWN3 711 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 ZNF223Q9UK11 482 aaPredicted RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 MRTO4Q9UKD2 239 aaKnown RBP16.85■□□□□ 0.29
HMGN1-206ENST00000431390 ZNF232Q9UNY5 417 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 PCDHGA10Q9Y5H3 936 aa16.85■□□□□ 0.29
HMGN1-206ENST00000431390 IGHV1-45A0A0A0MS14 117 aa16.84■□□□□ 0.29
HMGN1-206ENST00000431390 ACOX3O15254 700 aa16.84■□□□□ 0.29
HMGN1-206ENST00000431390 DPM1O60762 260 aa16.84■□□□□ 0.29
HMGN1-206ENST00000431390 DBIP07108 87 aaKnown RBP16.84■□□□□ 0.29
HMGN1-206ENST00000431390 PEX2P28328 305 aa16.84■□□□□ 0.29
HMGN1-206ENST00000431390 RNF4P78317 190 aa16.84■□□□□ 0.29
HMGN1-206ENST00000431390 SSPNQ14714 243 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms