RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 H3BN98 237 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 CFIP05156 583 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 GKN3PP0CG01 181 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 CNR2P34972 360 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 MAP2K4P45985 399 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 GPLD1P80108 840 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 PSG6Q00889 435 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 LARS2Q15031 903 aaKnown RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 HLA-BQ31612 363 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 GUSBP11Q6P575 273 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 AHSA2Q719I0 299 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 ZER1Q7Z7L7 766 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 P3H2Q8IVL5 708 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 MORN4Q8NDC4 146 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 ISOC1Q96CN7 298 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 POLR2J3Q9H1A7 115 aaKnown RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 CACYBPQ9HB71 228 aaKnown RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 VCX3AQ9NNX9 186 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 IMPAD1Q9NX62 359 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 ERVK-19Q9WJR5 959 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 TPRKBQ9Y3C4 175 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 COMMD3-BMI1R4GMX3 469 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 ASCC3Q8N3C0 2202 aaKnown RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 ADAMTS20P59510 1910 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 NCOR1O75376 2440 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 A0A087WUU8 490 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 ZAR1LA6NP61 321 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 ZNF749O43361 778 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 PRKNO60260 465 aaPredicted RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 BCAS1O75363 584 aaPredicted RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 CYP7B1O75881 506 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 OSMP13725 252 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 PRG2P13727 222 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 PCMT1P22061 227 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 EEF1A1P68104 462 aaKnown RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 IGLV3-21P80748 117 aaPredicted RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 NIPAL1Q6NVV3 410 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 ZCCHC12Q6PEW1 402 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 B3GNT6Q6ZMB0 384 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 PLEKHM3Q6ZWE6 761 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 KANSL1Q7Z3B3 1105 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 RHOXF1Q8NHV9 184 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 GAB3Q8WWW8 586 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 DIO2Q92813 273 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 SLC35B4Q969S0 331 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 MCHR1Q99705 422 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 DUSP21Q9H596 190 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 TRIM45Q9H8W5 580 aaPredicted RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 NLGN3Q9NZ94 848 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 SATB2Q9UPW6 733 aa15.49■□□□□ 0.07
USHBP1-203ENST00000431146 HEMK1Q9Y5R4 338 aaPredicted RBP15.49■□□□□ 0.07
USHBP1-203ENST00000431146 MN1Q10571 1320 aaPredicted RBP15.48■□□□□ 0.07
USHBP1-203ENST00000431146 TMEM221A6NGB7 291 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 PATE3B3GLJ2 98 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 H0YIG0 161 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 AP3D1O14617 1153 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 INMTO95050 263 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 KCNK2O95069 426 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 NKX2-2O95096 273 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 THY1P04216 161 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 TNNI3P19429 210 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 CXCR4P61073 352 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 EMX1Q04741 257 aaPredicted RBP15.48■□□□□ 0.07
USHBP1-203ENST00000431146 SIGLEC14Q08ET2 396 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 PERM1Q5SV97 790 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 MRPL2Q5T653 305 aaKnown RBP15.48■□□□□ 0.07
USHBP1-203ENST00000431146 C1orf189Q5VU69 101 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 CCDC81Q6ZN84 652 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 NKAIN4Q8IVV8 208 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 D2HGDHQ8N465 521 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 OR13F1Q8NGS4 319 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 MPP4Q96JB8 637 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 PHOX2BQ99453 314 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 PCDHGA10Q9Y5H3 936 aa15.48■□□□□ 0.07
USHBP1-203ENST00000431146 A0A1B0GTQ1 180 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 SIGLEC6O43699 453 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 KIAA0513O60268 411 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 BRINP1O60477 761 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 IGKV1D-16P01601 117 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 MT-ND2P03891 347 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 JUNBP17275 347 aaPredicted RBP15.47■□□□□ 0.07
USHBP1-203ENST00000431146 STT3AP46977 705 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 NR1D2Q14995 579 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 ZNF614Q8N883 585 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 ADAMTS18Q8TE60 1221 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 SAP25Q8TEE9 199 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 CLIP3Q96DZ5 547 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 SLC41A2Q96JW4 573 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 PTCHD1Q96NR3 888 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 SAP130Q9H0E3 1048 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 LANCL2Q9NS86 450 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 LY6G6EA0A0G2JKS1 128 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 A8MUA0 341 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 FADS2O95864 444 aaKnown RBP15.47■□□□□ 0.07
USHBP1-203ENST00000431146 TP53P04637 393 aaPredicted RBP15.47■□□□□ 0.07
USHBP1-203ENST00000431146 GABRB1P18505 474 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 RPS4Y1P22090 263 aaKnown RBP15.47■□□□□ 0.07
USHBP1-203ENST00000431146 HSD17B7P56937 341 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 CDC42P60953 191 aa15.47■□□□□ 0.07
USHBP1-203ENST00000431146 MINDY4Q4G0A6 757 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms