RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 DUSP22Q9NRW4 184 aa12.78□□□□□ -0.36
THBS3-202ENST00000428962 MED17Q9NVC6 651 aa12.78□□□□□ -0.36
THBS3-202ENST00000428962 CNIH4Q9P003 139 aa12.78□□□□□ -0.36
THBS3-202ENST00000428962 SSR3Q9UNL2 185 aa12.78□□□□□ -0.36
THBS3-202ENST00000428962 EXOSC1Q9Y3B2 195 aaKnown RBP12.78□□□□□ -0.36
THBS3-202ENST00000428962 FANCMQ8IYD8 2048 aa12.77□□□□□ -0.36
THBS3-202ENST00000428962 TMEM129A0AVI4 362 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 HYKKA2RU49 373 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 KRBA1A5PL33 1030 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 KDM4EB2RXH2 506 aaPredicted RBP12.77□□□□□ -0.37
THBS3-202ENST00000428962 LOC110117498-PIK3R3F6TDL0 507 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 PLOD3O60568 738 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 STX11O75558 287 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 GLULP15104 373 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 ETV6P41212 452 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 CD97P48960 835 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 WNT4P56705 351 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
THBS3-202ENST00000428962 DCST2Q5T1A1 773 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 FHL5Q5TD97 284 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 KIAA0895LQ68EN5 471 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 ARMC6Q6NXE6 501 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 GDF7Q7Z4P5 450 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 CSNK1A1LQ8N752 337 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 CLDN22Q8N7P3 220 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 SMRP1Q8NCR6 262 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 PIK3R3Q92569 461 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 RNFT2Q96EX2 444 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 CEP19Q96LK0 163 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 SDF2Q99470 211 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 ASPNQ9BXN1 380 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 KLHL25Q9H0H3 589 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 EVA1AQ9H8M9 152 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 SP140LQ9H930 580 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 POLMQ9NP87 494 aaPredicted RBP12.77□□□□□ -0.37
THBS3-202ENST00000428962 ISYNA1Q9NPH2 558 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 HRASLS2Q9NWW9 162 aa12.77□□□□□ -0.37
THBS3-202ENST00000428962 ZNF860A6NHJ4 632 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 ZNF670-ZNF695F2Z2N8 137 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 GPR75O95800 540 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 HBQ1P09105 142 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 CPEP16870 476 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 NT5EP21589 574 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 RPS4Y1P22090 263 aaKnown RBP12.76□□□□□ -0.37
THBS3-202ENST00000428962 MTNR1AP48039 350 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 COPZ1P61923 177 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 EEF1A1P68104 462 aaKnown RBP12.76□□□□□ -0.37
THBS3-202ENST00000428962 KRR1Q13601 381 aaKnown RBP12.76□□□□□ -0.37
THBS3-202ENST00000428962 TMEM31Q5JXX7 168 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 EXOSC6Q5RKV6 272 aaKnown RBP12.76□□□□□ -0.37
THBS3-202ENST00000428962 SNX29P2Q8IUI4 249 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 LYSMD2Q8IV50 215 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 COX18Q8N8Q8 333 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 ANKK1Q8NFD2 765 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 OR8D4Q8NGM9 314 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 CNPPD1Q9BV87 410 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 PRR14Q9BWN1 585 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 CPNE5Q9HCH3 593 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 ADAP2Q9NPF8 381 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 PRDM6Q9NQX0 595 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 POLE3Q9NRF9 147 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 ABCB10Q9NRK6 738 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 DOLKQ9UPQ8 538 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 CDH10Q9Y6N8 788 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 TRAPPC13A5PLN9 417 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 C10orf142B7Z368 130 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 KLF4O43474 513 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 FGF17O60258 216 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 GALR3O60755 368 aaPredicted RBP12.76□□□□□ -0.37
THBS3-202ENST00000428962 COQ9O75208 318 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 SOX30O94993 753 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 IGLV3-19P01714 112 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 TSPAN19P0C672 248 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 PVRP15151 417 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 GNSP15586 552 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 NUDT1P36639 197 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 CRYBB2P43320 205 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 RORCP51449 518 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 SNRPNP63162 240 aaKnown RBP12.76□□□□□ -0.37
THBS3-202ENST00000428962 SHC2P98077 582 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 GPR68Q15743 365 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 TRMT12Q53H54 448 aaKnown RBP12.76□□□□□ -0.37
THBS3-202ENST00000428962 ZNF620Q6ZNG0 422 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 TAF8Q7Z7C8 310 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 NKAIN4Q8IVV8 208 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 PHC2Q8IXK0 858 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 NRMQ8IXM6 262 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 SLC22A18ASQ8N1D0 253 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 PARP16Q8N5Y8 322 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 FLCNQ8NFG4 579 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 SLC37A2Q8TED4 501 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 IL21RQ9HBE5 538 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 EVA1BQ9NVM1 165 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 IL20Q9NYY1 176 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 ZNF229Q9UJW7 825 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 SLC7A7Q9UM01 511 aa12.76□□□□□ -0.37
THBS3-202ENST00000428962 MRPS2Q9Y399 296 aaKnown RBP12.76□□□□□ -0.37
THBS3-202ENST00000428962 STK25O00506 426 aa12.75□□□□□ -0.37
THBS3-202ENST00000428962 CYR61O00622 381 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms