RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 FLYWCH1Q4VC44 716 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 SFT2D3Q587I9 215 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 HES3Q5TGS1 186 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 HLA-DQA1Q5Y7H0 255 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 TCTN3Q6NUS6 607 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 FAHD1Q6P587 224 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 C6orf15Q6UXA7 325 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 TSEN54Q7Z6J9 526 aaKnown RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 RANBP3LQ86VV4 465 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 CARM1Q86X55 608 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 OFCC1Q8IZS5 231 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 SLC15A4Q8N697 577 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 SMYD1Q8NB12 490 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 OR4C15Q8NGM1 316 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 PHF10Q8WUB8 498 aaKnown RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 ADIPOR1Q96A54 375 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 RMND5BQ96G75 393 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 CCNL2Q96S94 520 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 GPR87Q9BY21 358 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 ITPAQ9BY32 194 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 ANKRD60Q9BZ19 345 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 AMBRA1Q9C0C7 1298 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 OR8D2Q9GZM6 311 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 WWTR1Q9GZV5 400 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 ZNF700Q9H0M5 742 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 ANKRA2Q9H9E1 313 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 EXOSC3Q9NQT5 275 aaKnown RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 SLC35A3Q9Y2D2 325 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 SH3GLB1Q9Y371 365 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 SAMHD1Q9Y3Z3 626 aaKnown RBP8.4□□□□□ -1.06
NR1I3-209ENST00000428574 OR10H1Q9Y4A9 318 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 ORC6Q9Y5N6 252 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 B3GALT1Q9Y5Z6 326 aa8.4□□□□□ -1.06
NR1I3-209ENST00000428574 SCN3AQ9NY46 2000 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 OTOGLQ3ZCN5 2332 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 C2orf92A0A1B0GVN3 265 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 HTR3EA5X5Y0 456 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 PRAMEF25A6NGN4 478 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 SAC3D1A6NKF1 404 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 hCG_2039718K7EN88 272 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 TNFRSF11BO00300 401 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 CDK2AP1O14519 115 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 UGT2B17O75795 530 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 KLF7O75840 302 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-209ENST00000428574 OR5F1O95221 314 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 GADD45GO95257 159 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 MT-ND1P03886 318 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 MMP11P24347 488 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 RRM2P31350 389 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 KRT20P35900 424 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 FOLR3P41439 243 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 TMED10P49755 219 aaKnown RBP8.39□□□□□ -1.07
NR1I3-209ENST00000428574 EFNA3P52797 238 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 PNLIPRP2P54317 469 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 NRG3P56975 720 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 IL18R1Q13478 541 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 MED21Q13503 144 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 EFR3AQ14156 821 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 FGFBP1Q14512 234 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 NHSL2Q5HYW2 709 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 SWT1Q5T5J6 900 aaKnown RBP8.39□□□□□ -1.07
NR1I3-209ENST00000428574 TTC23Q5W5X9 447 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 KDM4DQ6B0I6 523 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 PAPD4Q6PIY7 484 aaKnown RBP8.39□□□□□ -1.07
NR1I3-209ENST00000428574 NPSR1Q6W5P4 371 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 HSDL2Q6YN16 418 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 SLCO6A1Q86UG4 719 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 STK32CQ86UX6 486 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 LAPTM4BQ86VI4 370 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 C9orf40Q8IXQ3 194 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 DND1Q8IYX4 353 aaKnown RBP8.39□□□□□ -1.07
NR1I3-209ENST00000428574 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 SLC34A3Q8N130 599 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 ARMC10Q8N2F6 343 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 PARP8Q8N3A8 854 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 GALNT15Q8N3T1 639 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 MARVELD2Q8N4S9 558 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 BCORP1Q8N888 145 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 ZSCAN1Q8NBB4 408 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 APCDD1LQ8NCL9 501 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 SIMC1Q8NDZ2 872 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 M1APQ8TC57 530 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 TFAP2CQ92754 450 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 DIO2Q92813 273 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 MR1Q95460 341 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 IP6K3Q96PC2 410 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 SLC29A1Q99808 456 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 WDR77Q9BQA1 342 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-209ENST00000428574 FUZQ9BT04 418 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 NUDT9Q9BW91 350 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 UBQLN4Q9NRR5 601 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 MKLN1Q9UL63 735 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 PCDHGA6Q9Y5G7 932 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 LAMA1P25391 3075 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 DNAH14Q0VDD8 3507 aa8.39□□□□□ -1.07
NR1I3-209ENST00000428574 NUP214P35658 2090 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-209ENST00000428574 RALGAPA1Q6GYQ0 2036 aa8.38□□□□□ -1.07
NR1I3-209ENST00000428574 OR6C70A6NIJ9 312 aa8.38□□□□□ -1.07
NR1I3-209ENST00000428574 H3BNH8 94 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms