RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 ZG16O60844 167 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 SCN2BO60939 215 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 CLDN1O95832 211 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 IL18BPO95998 194 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 CRHP06850 196 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 TPOP07202 933 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 G6PDP11413 515 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 IDO1P14902 403 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF17P17021 662 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 IGFBP2P18065 325 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 TBXA2RP21731 343 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 EVI2BP34910 448 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ADH7P40394 386 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 KIR3DL1P43629 444 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 SUMO3P55854 103 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-203ENST00000428014 GFRA1P56159 465 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 CORO7P57737 925 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ADORA2A-AS1P86434 159 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF155Q12901 538 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-203ENST00000428014 GAB1Q13480 694 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 PTGR1Q14914 329 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 PRSS53Q2L4Q9 553 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 SLC25A35Q3KQZ1 300 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 FBXL19-AS1Q494R0 122 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF385BQ569K4 471 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 PRAMEF20Q5VT98 475 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 AAGABQ6PD74 315 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF551Q7Z340 670 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-203ENST00000428014 CD163Q86VB7 1156 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 LACC1Q8IV20 430 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 CHDHQ8NE62 594 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-203ENST00000428014 NUP43Q8NFH3 380 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 FAM120BQ96EK7 910 aaKnown RBP8.33□□□□□ -1.08
SMC1A-203ENST00000428014 NODALQ96S42 347 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ADOQ96SZ5 270 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 TTYH2Q9BSA4 534 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 BTBD2Q9BX70 525 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ACTRT3Q9BYD9 372 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ENKD1Q9H0I2 346 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 CENPHQ9H3R5 247 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 LDAHQ9H6V9 325 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 SDR39U1Q9NRG7 319 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-203ENST00000428014 UBQLN4Q9NRR5 601 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 PAQR5Q9NXK6 330 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-203ENST00000428014 KLRF1Q9NZS2 232 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ZIM2Q9NZV7 527 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF629Q9UEG4 869 aaPredicted RBP8.33□□□□□ -1.08
SMC1A-203ENST00000428014 TINAGQ9UJW2 476 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 PCDHGB4Q9UN71 923 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 PTGDR2Q9Y5Y4 395 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ITPR2Q14571 2701 aa8.33□□□□□ -1.08
SMC1A-203ENST00000428014 ATP6AP2A0A1C7CYW4 349 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 MBD3L4A6NDZ8 208 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 MBD3L3A6NE82 208 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 MBD3L5A6NJ08 208 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 HSPB2A8KAH6 182 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 FAM166BA8MTA8 275 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ETV2O00321 342 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 SKAP2O75563 359 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ATP6AP2O75787 350 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 HMGN2P05204 90 aaKnown RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 IL6P05231 212 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ALOX5P09917 674 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 RFPL3SP0C7P2 107 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ZCCHC18P0CG32 403 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 LAMP1P11279 417 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 BGNP21810 368 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 GDF1P27539 372 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ADH6P28332 368 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 CEACAM8P31997 349 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 CCT3P49368 545 aaKnown RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ANXA11P50995 505 aaKnown RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 EEFSECP57772 596 aaKnown RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 HSPB3Q12988 150 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 TP53BP2Q13625 1128 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 HSPB2Q16082 182 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 PDCD4Q53EL6 469 aaKnown RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 NSUN5P2Q63ZY6 315 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 WDR75Q8IWA0 830 aaKnown RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ULK2Q8IYT8 1036 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 TRIML2Q8N7C3 387 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 GOLGA6L1Q8N7Z2 621 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 SIMC1Q8NDZ2 872 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 MBD3L2Q8NHZ7 208 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 CCDC115Q96NT0 180 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 TIMP4Q99727 224 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 DPY30Q9C005 99 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 NMUR2Q9GZQ4 415 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ZCCHC3Q9NUD5 404 aaKnown RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 AIG1Q9NVV5 245 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 GPATCH2Q9NW75 528 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 THUMPD1Q9NXG2 353 aaKnown RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 BAIAP2L1Q9UHR4 511 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ACAD8Q9UKU7 415 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 FAF1Q9UNN5 650 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-203ENST00000428014 FIS1Q9Y3D6 152 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 ADGRG4Q8IZF6 3080 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 FREM3P0C091 2139 aa8.32□□□□□ -1.08
SMC1A-203ENST00000428014 E9PBE3 544 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 NPIPA2E9PIF3 369 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms