RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 DLG5Q8TDM6 1919 aa2.69□□□□□ -1.98
LINC01040-201ENST00000425048 INO80Q9ULG1 1556 aaPredicted RBP2.69□□□□□ -1.98
LINC01040-201ENST00000425048 CUL7Q14999 1698 aa2.69□□□□□ -1.98
LINC01040-201ENST00000425048 QRICH2Q9H0J4 1663 aa2.69□□□□□ -1.98
LINC01040-201ENST00000425048 ABCC5O15440 1437 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ATP10DQ9P241 1426 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 IQGAP3Q86VI3 1631 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ABCA9Q8IUA7 1624 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 DICER1Q9UPY3 1922 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ZNF233A6NK53 670 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ACSL4O60488 711 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 STX10O60499 249 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 SERF1AO75920 110 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 APOEP02649 317 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 KRT16P08779 473 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 SBK2P0C263 348 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PABPC4LP0CB38 370 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 TPBGLP0DKB5 382 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PSG2P11465 335 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PSMB1P20618 241 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 CD9P21926 228 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 CALB2P22676 271 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ANXA13P27216 316 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 CALML3P27482 149 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 GTF2H1P32780 548 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 SERPINB6P35237 376 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PCK1P35558 622 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 MRPS25P82663 173 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 DR1Q01658 176 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ITIH4Q14624 930 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 SLC10A1Q14973 349 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 LIN52Q52LA3 116 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 C6orf183Q5T699 404 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 SPATA1Q5VX52 437 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 SLC22A10Q63ZE4 541 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 SNRNP48Q6IEG0 339 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 RUFY3Q7L099 469 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ASRGL1Q7L266 308 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 SLC51BQ86UW2 128 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 VPS36Q86VN1 386 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 FBXW8Q8N3Y1 598 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 MREGQ8N565 214 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 LINC01555Q8NAE3 123 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 RNF149Q8NC42 400 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 CCDC148Q8NFR7 591 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 OR7G1Q8NGA0 311 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 RAPGEF5Q92565 580 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ZNF75CPQ92670 426 aaPredicted RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PEX13Q92968 403 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PIWIL1Q96J94 861 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 GBP5Q96PP8 586 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 CIB1Q99828 191 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 UQCC2Q9BRT2 126 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 DESI2Q9BSY9 194 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 CRNKL1Q9BZJ0 848 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 RNPEPL1Q9HAU8 725 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 IL1RL2Q9HB29 575 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PARVBQ9HBI1 364 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 POLD4Q9HCU8 107 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 RAB9BQ9NP90 201 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 HMGXB4Q9UGU5 601 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 TBK1Q9UHD2 729 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 NOCTQ9UK39 431 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 TDRKHQ9Y2W6 561 aaKnown RBP2.68□□□□□ -1.98
LINC01040-201ENST00000425048 ABCC12Q96J65 1359 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 NEO1Q92859 1461 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 TMEM131LA2VDJ0 1609 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PREX2Q70Z35 1606 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 AGLP35573 1532 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PTPRTO14522 1441 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 DAPK1P53355 1430 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 PCDH11XQ9BZA7 1347 aa2.68□□□□□ -1.98
LINC01040-201ENST00000425048 MYH9P35579 1960 aaKnown RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 NEURL4Q96JN8 1562 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ATP7BP35670 1465 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 NUP155O75694 1391 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 KIAA0232Q92628 1395 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 SH3PXD2BA1X283 911 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 OR5K4A6NMS3 321 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CCDC169A6NNP5 214 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 TMEM114B3SHH9 223 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 C19orf81C9J6K1 198 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 SPECC1L-ADORA2AF8WAN1 911 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 GOLGA8TH3BQL2 631 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 M0QX08 132 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 AP3B1O00203 1094 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 EEF2KO00418 725 aaKnown RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CETN3O15182 167 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 PDE5AO76074 875 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 PGLSO95336 258 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 OLFM2O95897 454 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 OAS1P00973 400 aaKnown RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 GOLGA8HP0CJ92 632 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 GZMAP12544 262 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ETS2P15036 469 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CTRB1P17538 263 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 GJB2P29033 226 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 GNA11P29992 359 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ATP5DP30049 168 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 PPOXP50336 477 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms